Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ALG1L9P (ALG1 like 9, pseudogene)

Identity

Alias (NCBI)-
HGNC (Hugo) ALG1L9P
LocusID (NCBI) 285407
Atlas_Id 60253
Location 11q13.4  [Link to chromosome band 11q13]
Location_base_pair Starts at 71795815 and ends at 71813859 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ALG1L9P   44378
Cards
Entrez_Gene (NCBI)ALG1L9P    ALG1 like 9, pseudogene
Aliases
GeneCards (Weizmann)ALG1L9P
Ensembl hg19 (Hinxton)ENSG00000248671 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248671 [Gene_View]  ENSG00000248671 [Sequence]  chr11:71795815-71813859 [Contig_View]  ALG1L9P [Vega]
ICGC DataPortalENSG00000248671
TCGA cBioPortalALG1L9P
AceView (NCBI)ALG1L9P
Genatlas (Paris)ALG1L9P
SOURCE (Princeton)ALG1L9P
Genetics Home Reference (NIH)ALG1L9P
Genomic and cartography
GoldenPath hg38 (UCSC)ALG1L9P  -     chr11:71795815-71813859 -  11q13.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ALG1L9P  -     11q13.4   [Description]    (hg19-Feb_2009)
GoldenPathALG1L9P - 11q13.4 [CytoView hg19]  ALG1L9P - 11q13.4 [CytoView hg38]
ImmunoBaseENSG00000248671
genome Data Viewer NCBIALG1L9P [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AL534280 BC054093 BC073927 R18473
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ALG1L9P
Alternative Splicing GalleryENSG00000248671
Gene ExpressionALG1L9P [ NCBI-GEO ]   ALG1L9P [ EBI - ARRAY_EXPRESS ]   ALG1L9P [ SEEK ]   ALG1L9P [ MEM ]
Gene Expression Viewer (FireBrowse)ALG1L9P [ Firebrowse - Broad ]
GenevisibleExpression of ALG1L9P in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285407
GTEX Portal (Tissue expression)ALG1L9P
Human Protein AtlasENSG00000248671-ALG1L9P [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ALG1L9P
Blocks (Seattle)ALG1L9P
Human Protein Atlas [tissue]ENSG00000248671-ALG1L9P [tissue]
IPIIPI00748292   
Protein Interaction databases
BioGRIDALG1L9P
STRING (EMBL)ALG1L9P
ZODIACALG1L9P
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineALG1L9P
EVEXALG1L9P
GoPubMedALG1L9P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 16:45:32 CET 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.