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AMN1 (antagonist of mitotic exit network 1 homolog)

Identity

Alias_namesantagonist of mitotic exit network 1 homolog (S. cerevisiae)
Other alias-
HGNC (Hugo) AMN1
LocusID (NCBI) 196394
Atlas_Id 60278
Location 12p11.21  [Link to chromosome band 12p11]
Location_base_pair Starts at 31671137 and ends at 31729174 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
AMN1 (12p11.21) / FAR2 (12p11.22)AMN1 (12p11.21) / MAPK8 (10q11.22)CAPRIN2 (12p11.21) / AMN1 (12p11.21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AMN1   27281
Cards
Entrez_Gene (NCBI)AMN1  196394  antagonist of mitotic exit network 1 homolog
Aliases
GeneCards (Weizmann)AMN1
Ensembl hg19 (Hinxton)ENSG00000151743 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000151743 [Gene_View]  chr12:31671137-31729174 [Contig_View]  AMN1 [Vega]
ICGC DataPortalENSG00000151743
TCGA cBioPortalAMN1
AceView (NCBI)AMN1
Genatlas (Paris)AMN1
WikiGenes196394
SOURCE (Princeton)AMN1
Genetics Home Reference (NIH)AMN1
Genomic and cartography
GoldenPath hg38 (UCSC)AMN1  -     chr12:31671137-31729174 -  12p11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AMN1  -     12p11.21   [Description]    (hg19-Feb_2009)
EnsemblAMN1 - 12p11.21 [CytoView hg19]  AMN1 - 12p11.21 [CytoView hg38]
Mapping of homologs : NCBIAMN1 [Mapview hg19]  AMN1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK094708 AK123033 AK302112 AK311214 AK311249
RefSeq transcript (Entrez)NM_001113402 NM_001278411 NM_001278412
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AMN1
Cluster EST : UnigeneHs.740628 [ NCBI ]
CGAP (NCI)Hs.740628
Alternative Splicing GalleryENSG00000151743
Gene ExpressionAMN1 [ NCBI-GEO ]   AMN1 [ EBI - ARRAY_EXPRESS ]   AMN1 [ SEEK ]   AMN1 [ MEM ]
Gene Expression Viewer (FireBrowse)AMN1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)196394
GTEX Portal (Tissue expression)AMN1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IY45   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IY45  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IY45
Splice isoforms : SwissVarQ8IY45
PhosPhoSitePlusQ8IY45
Domains : Interpro (EBI)L_dom-like    Leu-rich_rpt    Leu-rich_rpt_Cys-con_subtyp   
Domain families : Pfam (Sanger)LRR_6 (PF13516)   
Domain families : Pfam (NCBI)pfam13516   
Domain families : Smart (EMBL)LRR_CC (SM00367)  
Conserved Domain (NCBI)AMN1
DMDM Disease mutations196394
Blocks (Seattle)AMN1
SuperfamilyQ8IY45
Human Protein AtlasENSG00000151743
Peptide AtlasQ8IY45
HPRD14115
IPIIPI00747623   IPI01014168   IPI01013165   IPI01012242   IPI01012771   IPI01011732   IPI01011811   IPI01010771   
Protein Interaction databases
DIP (DOE-UCLA)Q8IY45
IntAct (EBI)Q8IY45
FunCoupENSG00000151743
BioGRIDAMN1
STRING (EMBL)AMN1
ZODIACAMN1
Ontologies - Pathways
QuickGOQ8IY45
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkAMN1
Atlas of Cancer Signalling NetworkAMN1
Wikipedia pathwaysAMN1
Orthology - Evolution
OrthoDB196394
GeneTree (enSembl)ENSG00000151743
Phylogenetic Trees/Animal Genes : TreeFamAMN1
HOVERGENQ8IY45
HOGENOMQ8IY45
Homologs : HomoloGeneAMN1
Homology/Alignments : Family Browser (UCSC)AMN1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAMN1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AMN1
dbVarAMN1
ClinVarAMN1
1000_GenomesAMN1 
Exome Variant ServerAMN1
ExAC (Exome Aggregation Consortium)AMN1 (select the gene name)
Genetic variants : HAPMAP196394
Genomic Variants (DGV)AMN1 [DGVbeta]
DECIPHERAMN1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAMN1 
Mutations
ICGC Data PortalAMN1 
TCGA Data PortalAMN1 
Broad Tumor PortalAMN1
OASIS PortalAMN1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAMN1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAMN1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AMN1
DgiDB (Drug Gene Interaction Database)AMN1
DoCM (Curated mutations)AMN1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AMN1 (select a term)
intoGenAMN1
Cancer3DAMN1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenAMN1
Genetic Testing Registry AMN1
NextProtQ8IY45 [Medical]
TSGene196394
GENETestsAMN1
Target ValidationAMN1
Huge Navigator AMN1 [HugePedia]
snp3D : Map Gene to Disease196394
BioCentury BCIQAMN1
ClinGenAMN1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD196394
Chemical/Pharm GKB GenePA162376371
Clinical trialAMN1
Miscellaneous
canSAR (ICR)AMN1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAMN1
EVEXAMN1
GoPubMedAMN1
iHOPAMN1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:37:59 CEST 2017

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