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ANAPC15 (anaphase promoting complex subunit 15)

Identity

Alias_namesC11orf51
chromosome 11 open reading frame 51
Alias_symbol (synonym)HSPC020
DKFZP564M082
APC15
Other alias
HGNC (Hugo) ANAPC15
LocusID (NCBI) 25906
Atlas_Id 60289
Location 11q13.4  [Link to chromosome band 11q13]
Location_base_pair Starts at 72109587 and ends at 72112776 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
RNF169 (11q13.4) / ANAPC15 (11q13.4)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANAPC15   24531
Cards
Entrez_Gene (NCBI)ANAPC15  25906  anaphase promoting complex subunit 15
AliasesAPC15; C11orf51; HSPC020
GeneCards (Weizmann)ANAPC15
Ensembl hg19 (Hinxton)ENSG00000110200 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000110200 [Gene_View]  chr11:72109587-72112776 [Contig_View]  ANAPC15 [Vega]
ICGC DataPortalENSG00000110200
TCGA cBioPortalANAPC15
AceView (NCBI)ANAPC15
Genatlas (Paris)ANAPC15
WikiGenes25906
SOURCE (Princeton)ANAPC15
Genetics Home Reference (NIH)ANAPC15
Genomic and cartography
GoldenPath hg38 (UCSC)ANAPC15  -     chr11:72109587-72112776 -  11q13.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANAPC15  -     11q13.4   [Description]    (hg19-Feb_2009)
EnsemblANAPC15 - 11q13.4 [CytoView hg19]  ANAPC15 - 11q13.4 [CytoView hg38]
Mapping of homologs : NCBIANAPC15 [Mapview hg19]  ANAPC15 [Mapview hg38]
OMIM614717   
Gene and transcription
Genbank (Entrez)AF077206 AK222622 AK311146 AL080071 BC005156
RefSeq transcript (Entrez)NM_001278485 NM_001278486 NM_001278487 NM_001278488 NM_001278489 NM_001278490 NM_001278491 NM_001278492 NM_001278493 NM_001278494 NM_001330321 NM_014042
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANAPC15
Cluster EST : UnigeneHs.38044 [ NCBI ]
CGAP (NCI)Hs.38044
Alternative Splicing GalleryENSG00000110200
Gene ExpressionANAPC15 [ NCBI-GEO ]   ANAPC15 [ EBI - ARRAY_EXPRESS ]   ANAPC15 [ SEEK ]   ANAPC15 [ MEM ]
Gene Expression Viewer (FireBrowse)ANAPC15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25906
GTEX Portal (Tissue expression)ANAPC15
Protein : pattern, domain, 3D structure
UniProt/SwissProtP60006   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP60006  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP60006
Splice isoforms : SwissVarP60006
PhosPhoSitePlusP60006
Domains : Interpro (EBI)ANAPC15   
Domain families : Pfam (Sanger)ANAPC15 (PF15243)   
Domain families : Pfam (NCBI)pfam15243   
Conserved Domain (NCBI)ANAPC15
DMDM Disease mutations25906
Blocks (Seattle)ANAPC15
PDB (SRS)4UI9    5A31    5G04    5G05    5L9T    5L9U    5LCW   
PDB (PDBSum)4UI9    5A31    5G04    5G05    5L9T    5L9U    5LCW   
PDB (IMB)4UI9    5A31    5G04    5G05    5L9T    5L9U    5LCW   
PDB (RSDB)4UI9    5A31    5G04    5G05    5L9T    5L9U    5LCW   
Structural Biology KnowledgeBase4UI9    5A31    5G04    5G05    5L9T    5L9U    5LCW   
SCOP (Structural Classification of Proteins)4UI9    5A31    5G04    5G05    5L9T    5L9U    5LCW   
CATH (Classification of proteins structures)4UI9    5A31    5G04    5G05    5L9T    5L9U    5LCW   
SuperfamilyP60006
Human Protein AtlasENSG00000110200
Peptide AtlasP60006
HPRD13172
IPIIPI00022312   IPI01009445   IPI01010644   IPI01009304   IPI01015097   IPI01013541   IPI00941478   IPI01010936   IPI01009713   
Protein Interaction databases
DIP (DOE-UCLA)P60006
IntAct (EBI)P60006
FunCoupENSG00000110200
BioGRIDANAPC15
STRING (EMBL)ANAPC15
ZODIACANAPC15
Ontologies - Pathways
QuickGOP60006
Ontology : AmiGOintracellular  nucleoplasm  anaphase-promoting complex  cytosol  anaphase-promoting complex-dependent catabolic process  protein ubiquitination involved in ubiquitin-dependent protein catabolic process  proteasome-mediated ubiquitin-dependent protein catabolic process  cell division  negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition  regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  regulation of mitotic cell cycle spindle assembly checkpoint  
Ontology : EGO-EBIintracellular  nucleoplasm  anaphase-promoting complex  cytosol  anaphase-promoting complex-dependent catabolic process  protein ubiquitination involved in ubiquitin-dependent protein catabolic process  proteasome-mediated ubiquitin-dependent protein catabolic process  cell division  negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition  regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  regulation of mitotic cell cycle spindle assembly checkpoint  
NDEx NetworkANAPC15
Atlas of Cancer Signalling NetworkANAPC15
Wikipedia pathwaysANAPC15
Orthology - Evolution
OrthoDB25906
GeneTree (enSembl)ENSG00000110200
Phylogenetic Trees/Animal Genes : TreeFamANAPC15
HOVERGENP60006
HOGENOMP60006
Homologs : HomoloGeneANAPC15
Homology/Alignments : Family Browser (UCSC)ANAPC15
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANAPC15 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANAPC15
dbVarANAPC15
ClinVarANAPC15
1000_GenomesANAPC15 
Exome Variant ServerANAPC15
ExAC (Exome Aggregation Consortium)ANAPC15 (select the gene name)
Genetic variants : HAPMAP25906
Genomic Variants (DGV)ANAPC15 [DGVbeta]
DECIPHERANAPC15 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANAPC15 
Mutations
ICGC Data PortalANAPC15 
TCGA Data PortalANAPC15 
Broad Tumor PortalANAPC15
OASIS PortalANAPC15 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDANAPC15
BioMutasearch ANAPC15
DgiDB (Drug Gene Interaction Database)ANAPC15
DoCM (Curated mutations)ANAPC15 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANAPC15 (select a term)
intoGenANAPC15
Cancer3DANAPC15(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614717   
Orphanet
MedgenANAPC15
Genetic Testing Registry ANAPC15
NextProtP60006 [Medical]
TSGene25906
GENETestsANAPC15
Target ValidationANAPC15
Huge Navigator ANAPC15 [HugePedia]
snp3D : Map Gene to Disease25906
BioCentury BCIQANAPC15
ClinGenANAPC15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD25906
Chemical/Pharm GKB GenePA143485346
Clinical trialANAPC15
Miscellaneous
canSAR (ICR)ANAPC15 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANAPC15
EVEXANAPC15
GoPubMedANAPC15
iHOPANAPC15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:15 CEST 2017

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