Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ANAPC7 (anaphase promoting complex subunit 7)

Identity

Other namesAPC7
HGNC (Hugo) ANAPC7
LocusID (NCBI) 51434
Location 12q24.11
Location_base_pair Starts at 110813272 and ends at 110841535 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ANAPC7   17380
Entrez_Gene (NCBI)ANAPC7  51434  anaphase promoting complex subunit 7
Cards
GeneCards (Weizmann)ANAPC7
Ensembl (Hinxton)ENSG00000196510 [Gene_View]  chr12:110813272-110841535 [Contig_View]  ANAPC7 [Vega]
AceView (NCBI)ANAPC7
Genatlas (Paris)ANAPC7
SOURCE (Stanford)NM_001137664 NM_016238
Genomic and cartography
GoldenPath (UCSC)ANAPC7  -  12q24.11   chr12:110813272-110841535 -  12q24.11   [Description]    (hg19-Feb_2009)
EnsemblANAPC7 - 12q24.11 [CytoView]
Mapping of homologs : NCBIANAPC7 [Mapview]
OMIM606949   
Gene and transcription
Genbank (Entrez)AF191340 AK021809 AL137586 AL157481 AY007104
RefSeq transcript (SRS)NM_001137664 NM_016238
RefSeq transcript (Entrez)NM_001137664 NM_016238
RefSeq genomic (SRS)AC_000144 NC_000012 NC_018923 NT_009775 NW_001838062 NW_004078075
RefSeq genomic (Entrez)AC_000144 NC_000012 NC_018923 NT_009775 NW_001838062 NW_004078075
Consensus coding sequences : CCDS (NCBI)ANAPC7
Cluster EST : UnigeneHs.719935 [ SRS ] Hs.719935 [ NCBI ]
CGAP (NCI)Hs.719935
Alternative Splicing : Fast-db (Paris)GSHG0007774
Alternative Splicing GalleryENSG00000196510
Gene ExpressionANAPC7 [ NCBI-GEO ]   ANAPC7 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UJX3 (SRS) Q9UJX3 (Uniprot)
NextProtQ9UJX3
With graphics : InterProQ9UJX3
Splice isoforms : SwissVarQ9UJX3(Swissvar)
Domaine pattern : Prosite (SRS)TPR (PS50005)    TPR_REGION (PS50293)   
Domaine pattern : Prosite (Expaxy)TPR (PS50005)    TPR_REGION (PS50293)   
Domains : Interpro (SRS)TPR-contain_dom    TPR-like_helical    TPR_2    TPR_repeat   
Domains : Interpro (EBI)TPR-contain_dom    TPR-like_helical    TPR_2    TPR_repeat   
Related proteins : CluSTrQ9UJX3
Domain families : Pfam (SRS)TPR_2 (PF07719)   
Domain families : Pfam (Sanger)TPR_2 (PF07719)   
Domain families : Pfam (NCBI)pfam07719   
Domain families : Smart (EMBL)TPR (SM00028)  
DMDM51434
Blocks (Seattle)Q9UJX3
PDB (SRS)3FFL   
PDB (PDBSum)3FFL   
PDB (IMB)3FFL   
PDB (RSDB)3FFL   
Human Protein AtlasENSG00000196510
HPRD16233
IPIIPI00008248   IPI00915282   IPI01022592   IPI01022736   IPI01022252   IPI01022361   IPI01021898   IPI01022075   
Protein Interaction databases
DIP (DOE-UCLA)Q9UJX3
IntAct (EBI)Q9UJX3
FunCoupENSG00000196510
REACTOMEANAPC7
Protein Interaction Database51434
BioGRIDANAPC7
InParanoidQ9UJX3
Interologous Interaction database Q9UJX3
IntegromeDBANAPC7
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ANAPC7
SNP (GeneSNP Utah)ANAPC7
SNP : HGBaseANAPC7
Genetic variants : HAPMAPANAPC7
Somatic Mutations in Cancer : COSMICANAPC7 
CONAN: Copy Number AnalysisANAPC7 
Mutations and Diseases : HGMDANAPC7
OMIM606949   
GENETests606949   
Disease Genetic AssociationANAPC7
Huge Navigator ANAPC7 [HugePedia]  ANAPC7 [HugeCancerGEM]
Genomic VariantsANAPC7  ANAPC7 [DGVbeta]
snp3D : Map Gene to Disease51434
General knowledge
Homologs : HomoloGeneANAPC7
Homology/Alignments : Family Browser (UCSC)ANAPC7
Phylogenetic Trees/Animal Genes : TreeFamANAPC7
Chemical/Protein Interactions : CTD51434
Chemical/Pharm GKB GenePA134901290
Clinical trialANAPC7
Cancer Resource (Charite)ENSG00000196510
Ontology : AmiGOcell cycle checkpoint  mitotic cell cycle  nucleus  nucleoplasm  anaphase-promoting complex  cytosol  mitosis  mitotic cell cycle spindle assembly checkpoint  protein phosphatase binding  anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process  cell division  negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  protein K11-linked ubiquitination  
Ontology : EGO-EBIcell cycle checkpoint  mitotic cell cycle  nucleus  nucleoplasm  anaphase-promoting complex  cytosol  mitosis  mitotic cell cycle spindle assembly checkpoint  protein phosphatase binding  anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process  cell division  negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle  protein K11-linked ubiquitination  
Pathways : KEGGCell cycleUbiquitin mediated proteolysis
Other databases
Probes
Litterature
PubMed60 Pubmed reference(s) in Entrez
PubGeneANAPC7
iHOPANAPC7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:19:39 CEST 2013
Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.