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ANGEL2 (angel homolog 2)

Identity

Alias_namesangel homolog 2 (Drosophila)
Alias_symbol (synonym)KIAA0759L
FLJ12793
Ccr4d
Other alias
HGNC (Hugo) ANGEL2
LocusID (NCBI) 90806
Atlas_Id 60294
Location 1q32.3  [Link to chromosome band 1q32]
Location_base_pair Starts at 212992182 and ends at 213015875 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ANGEL2 (1q32.3) / PAPOLA (14q32.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANGEL2   30534
Cards
Entrez_Gene (NCBI)ANGEL2  90806  angel homolog 2
AliasesCcr4d; KIAA0759L
GeneCards (Weizmann)ANGEL2
Ensembl hg19 (Hinxton)ENSG00000174606 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000174606 [Gene_View]  chr1:212992182-213015875 [Contig_View]  ANGEL2 [Vega]
ICGC DataPortalENSG00000174606
TCGA cBioPortalANGEL2
AceView (NCBI)ANGEL2
Genatlas (Paris)ANGEL2
WikiGenes90806
SOURCE (Princeton)ANGEL2
Genetics Home Reference (NIH)ANGEL2
Genomic and cartography
GoldenPath hg38 (UCSC)ANGEL2  -     chr1:212992182-213015875 -  1q32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANGEL2  -     1q32.3   [Description]    (hg19-Feb_2009)
EnsemblANGEL2 - 1q32.3 [CytoView hg19]  ANGEL2 - 1q32.3 [CytoView hg38]
Mapping of homologs : NCBIANGEL2 [Mapview hg19]  ANGEL2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF510741 AI658922 AK022855 AK093947 AK294479
RefSeq transcript (Entrez)NM_001300753 NM_001300755 NM_001300757 NM_001300758 NM_144567
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANGEL2
Cluster EST : UnigeneHs.157078 [ NCBI ]
CGAP (NCI)Hs.157078
Alternative Splicing GalleryENSG00000174606
Gene ExpressionANGEL2 [ NCBI-GEO ]   ANGEL2 [ EBI - ARRAY_EXPRESS ]   ANGEL2 [ SEEK ]   ANGEL2 [ MEM ]
Gene Expression Viewer (FireBrowse)ANGEL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90806
GTEX Portal (Tissue expression)ANGEL2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5VTE6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5VTE6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5VTE6
Splice isoforms : SwissVarQ5VTE6
PhosPhoSitePlusQ5VTE6
Domains : Interpro (EBI)Endo/exonuclease/phosphatase   
Domain families : Pfam (Sanger)Exo_endo_phos (PF03372)   
Domain families : Pfam (NCBI)pfam03372   
Conserved Domain (NCBI)ANGEL2
DMDM Disease mutations90806
Blocks (Seattle)ANGEL2
SuperfamilyQ5VTE6
Human Protein AtlasENSG00000174606
Peptide AtlasQ5VTE6
HPRD14279
IPIIPI00478899   IPI00375317   IPI01009437   IPI01012042   IPI00843775   
Protein Interaction databases
DIP (DOE-UCLA)Q5VTE6
IntAct (EBI)Q5VTE6
FunCoupENSG00000174606
BioGRIDANGEL2
STRING (EMBL)ANGEL2
ZODIACANGEL2
Ontologies - Pathways
QuickGOQ5VTE6
Ontology : AmiGOmRNA 3'-UTR binding  cytoplasm  Cajal body  negative regulation of mitotic cell cycle  3'-UTR-mediated mRNA stabilization  
Ontology : EGO-EBImRNA 3'-UTR binding  cytoplasm  Cajal body  negative regulation of mitotic cell cycle  3'-UTR-mediated mRNA stabilization  
NDEx NetworkANGEL2
Atlas of Cancer Signalling NetworkANGEL2
Wikipedia pathwaysANGEL2
Orthology - Evolution
OrthoDB90806
GeneTree (enSembl)ENSG00000174606
Phylogenetic Trees/Animal Genes : TreeFamANGEL2
HOVERGENQ5VTE6
HOGENOMQ5VTE6
Homologs : HomoloGeneANGEL2
Homology/Alignments : Family Browser (UCSC)ANGEL2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANGEL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANGEL2
dbVarANGEL2
ClinVarANGEL2
1000_GenomesANGEL2 
Exome Variant ServerANGEL2
ExAC (Exome Aggregation Consortium)ANGEL2 (select the gene name)
Genetic variants : HAPMAP90806
Genomic Variants (DGV)ANGEL2 [DGVbeta]
DECIPHERANGEL2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANGEL2 
Mutations
ICGC Data PortalANGEL2 
TCGA Data PortalANGEL2 
Broad Tumor PortalANGEL2
OASIS PortalANGEL2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANGEL2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANGEL2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANGEL2
DgiDB (Drug Gene Interaction Database)ANGEL2
DoCM (Curated mutations)ANGEL2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANGEL2 (select a term)
intoGenANGEL2
Cancer3DANGEL2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenANGEL2
Genetic Testing Registry ANGEL2
NextProtQ5VTE6 [Medical]
TSGene90806
GENETestsANGEL2
Target ValidationANGEL2
Huge Navigator ANGEL2 [HugePedia]
snp3D : Map Gene to Disease90806
BioCentury BCIQANGEL2
ClinGenANGEL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90806
Chemical/Pharm GKB GenePA142672620
Clinical trialANGEL2
Miscellaneous
canSAR (ICR)ANGEL2 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANGEL2
EVEXANGEL2
GoPubMedANGEL2
iHOPANGEL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:38:03 CEST 2017

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