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ANKAR (ankyrin and armadillo repeat containing)

Identity

Alias_symbol (synonym)FLJ25415
Other alias-
HGNC (Hugo) ANKAR
LocusID (NCBI) 150709
Atlas_Id 60298
Location 2q32.2  [Link to chromosome band 2q32]
Location_base_pair Starts at 189675985 and ends at 189746650 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKAR   26350
Cards
Entrez_Gene (NCBI)ANKAR  150709  ankyrin and armadillo repeat containing
Aliases
GeneCards (Weizmann)ANKAR
Ensembl hg19 (Hinxton)ENSG00000151687 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000151687 [Gene_View]  chr2:189675985-189746650 [Contig_View]  ANKAR [Vega]
ICGC DataPortalENSG00000151687
TCGA cBioPortalANKAR
AceView (NCBI)ANKAR
Genatlas (Paris)ANKAR
WikiGenes150709
SOURCE (Princeton)ANKAR
Genetics Home Reference (NIH)ANKAR
Genomic and cartography
GoldenPath hg38 (UCSC)ANKAR  -     chr2:189675985-189746650 +  2q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKAR  -     2q32.2   [Description]    (hg19-Feb_2009)
EnsemblANKAR - 2q32.2 [CytoView hg19]  ANKAR - 2q32.2 [CytoView hg38]
Mapping of homologs : NCBIANKAR [Mapview hg19]  ANKAR [Mapview hg38]
OMIM609803   
Gene and transcription
Genbank (Entrez)AJ549812 AJ605761 AK027836 AK058144 AK098551
RefSeq transcript (Entrez)NM_144708
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKAR
Cluster EST : UnigeneHs.655700 [ NCBI ]
CGAP (NCI)Hs.655700
Alternative Splicing GalleryENSG00000151687
Gene ExpressionANKAR [ NCBI-GEO ]   ANKAR [ EBI - ARRAY_EXPRESS ]   ANKAR [ SEEK ]   ANKAR [ MEM ]
Gene Expression Viewer (FireBrowse)ANKAR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)150709
GTEX Portal (Tissue expression)ANKAR
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z5J8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z5J8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z5J8
Splice isoforms : SwissVarQ7Z5J8
PhosPhoSitePlusQ7Z5J8
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)    ARM_REPEAT (PS50176)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    ARM-like    ARM-type_fold    Armadillo   
Domain families : Pfam (Sanger)Ank_2 (PF12796)    Arm (PF00514)   
Domain families : Pfam (NCBI)pfam12796    pfam00514   
Domain families : Smart (EMBL)ANK (SM00248)  ARM (SM00185)  
Conserved Domain (NCBI)ANKAR
DMDM Disease mutations150709
Blocks (Seattle)ANKAR
SuperfamilyQ7Z5J8
Human Protein AtlasENSG00000151687
Peptide AtlasQ7Z5J8
IPIIPI00374192   IPI00845277   IPI00845352   IPI00845337   IPI01009028   IPI00423380   IPI00942566   IPI00978504   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z5J8
IntAct (EBI)Q7Z5J8
FunCoupENSG00000151687
BioGRIDANKAR
STRING (EMBL)ANKAR
ZODIACANKAR
Ontologies - Pathways
QuickGOQ7Z5J8
Ontology : AmiGOnucleus  cytoplasm  integral component of membrane  
Ontology : EGO-EBInucleus  cytoplasm  integral component of membrane  
NDEx NetworkANKAR
Atlas of Cancer Signalling NetworkANKAR
Wikipedia pathwaysANKAR
Orthology - Evolution
OrthoDB150709
GeneTree (enSembl)ENSG00000151687
Phylogenetic Trees/Animal Genes : TreeFamANKAR
HOVERGENQ7Z5J8
HOGENOMQ7Z5J8
Homologs : HomoloGeneANKAR
Homology/Alignments : Family Browser (UCSC)ANKAR
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKAR [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKAR
dbVarANKAR
ClinVarANKAR
1000_GenomesANKAR 
Exome Variant ServerANKAR
ExAC (Exome Aggregation Consortium)ANKAR (select the gene name)
Genetic variants : HAPMAP150709
Genomic Variants (DGV)ANKAR [DGVbeta]
DECIPHERANKAR [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKAR 
Mutations
ICGC Data PortalANKAR 
TCGA Data PortalANKAR 
Broad Tumor PortalANKAR
OASIS PortalANKAR [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKAR  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANKAR
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANKAR
DgiDB (Drug Gene Interaction Database)ANKAR
DoCM (Curated mutations)ANKAR (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKAR (select a term)
intoGenANKAR
Cancer3DANKAR(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609803   
Orphanet
MedgenANKAR
Genetic Testing Registry ANKAR
NextProtQ7Z5J8 [Medical]
TSGene150709
GENETestsANKAR
Target ValidationANKAR
Huge Navigator ANKAR [HugePedia]
snp3D : Map Gene to Disease150709
BioCentury BCIQANKAR
ClinGenANKAR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150709
Chemical/Pharm GKB GenePA145149868
Clinical trialANKAR
Miscellaneous
canSAR (ICR)ANKAR (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKAR
EVEXANKAR
GoPubMedANKAR
iHOPANKAR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:38:04 CEST 2017

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