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ANKHD1-EIF4EBP3 (ANKHD1-EIF4EBP3 readthrough)

Identity

Alias_symbol (synonym)MASK-BP3
Other aliasMASK-BP3ARF
HGNC (Hugo) ANKHD1-EIF4EBP3
LocusID (NCBI) 404734
Atlas_Id 60303
Location 5q31.3  [Link to chromosome band 5q31]
Location_base_pair Starts at 140401814 and ends at 140549578 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ANKHD1-EIF4EBP3 (5q31.3) / GTF2I (7q11.23)ANKHD1-EIF4EBP3 (5q31.3) / SCAF8 (6q25.2)KMT2A (11q23.3) / ANKHD1-EIF4EBP3 (5q31.3)
TAGLN (11q23.3) / ANKHD1-EIF4EBP3 (5q31.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKHD1-EIF4EBP3   33530
Cards
Entrez_Gene (NCBI)ANKHD1-EIF4EBP3  404734  ANKHD1-EIF4EBP3 readthrough
AliasesMASK-BP3; MASK-BP3ARF
GeneCards (Weizmann)ANKHD1-EIF4EBP3
Ensembl hg19 (Hinxton)ENSG00000131503 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000131503 [Gene_View]  chr5:140401814-140549578 [Contig_View]  ANKHD1-EIF4EBP3 [Vega]
ICGC DataPortalENSG00000131503
TCGA cBioPortalANKHD1-EIF4EBP3
AceView (NCBI)ANKHD1-EIF4EBP3
Genatlas (Paris)ANKHD1-EIF4EBP3
WikiGenes404734
SOURCE (Princeton)ANKHD1-EIF4EBP3
Genetics Home Reference (NIH)ANKHD1-EIF4EBP3
Genomic and cartography
GoldenPath hg38 (UCSC)ANKHD1-EIF4EBP3  -     chr5:140401814-140549578 +  5q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKHD1-EIF4EBP3  -     5q31.3   [Description]    (hg19-Feb_2009)
EnsemblANKHD1-EIF4EBP3 - 5q31.3 [CytoView hg19]  ANKHD1-EIF4EBP3 - 5q31.3 [CytoView hg38]
Mapping of homologs : NCBIANKHD1-EIF4EBP3 [Mapview hg19]  ANKHD1-EIF4EBP3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB029008 AF521883 AK125734 BC144623 BC172416
RefSeq transcript (Entrez)NM_020690
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKHD1-EIF4EBP3
Cluster EST : UnigeneHs.594084 [ NCBI ]
CGAP (NCI)Hs.594084
Alternative Splicing GalleryENSG00000131503
Gene ExpressionANKHD1-EIF4EBP3 [ NCBI-GEO ]   ANKHD1-EIF4EBP3 [ EBI - ARRAY_EXPRESS ]   ANKHD1-EIF4EBP3 [ SEEK ]   ANKHD1-EIF4EBP3 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKHD1-EIF4EBP3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)404734
GTEX Portal (Tissue expression)ANKHD1-EIF4EBP3
Human Protein AtlasENSG00000131503-ANKHD1-EIF4EBP3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ANKHD1-EIF4EBP3
DMDM Disease mutations404734
Blocks (Seattle)ANKHD1-EIF4EBP3
Human Protein Atlas [tissue]ENSG00000131503-ANKHD1-EIF4EBP3 [tissue]
HPRD17468
IPIIPI00797397   IPI00556571   IPI00410680   IPI00871927   IPI00654628   IPI00829921   IPI00815707   IPI01012280   IPI01018721   IPI00798060   IPI00790296   IPI00217442   IPI00797665   IPI00798374   IPI01013084   IPI00965077   IPI01013411   IPI01019034   
Protein Interaction databases
FunCoupENSG00000131503
BioGRIDANKHD1-EIF4EBP3
STRING (EMBL)ANKHD1-EIF4EBP3
ZODIACANKHD1-EIF4EBP3
Ontologies - Pathways
Huge Navigator ANKHD1-EIF4EBP3 [HugePedia]
snp3D : Map Gene to Disease404734
BioCentury BCIQANKHD1-EIF4EBP3
ClinGenANKHD1-EIF4EBP3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD404734
Chemical/Pharm GKB GenePA162376432
Clinical trialANKHD1-EIF4EBP3
Miscellaneous
canSAR (ICR)ANKHD1-EIF4EBP3 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKHD1-EIF4EBP3
EVEXANKHD1-EIF4EBP3
GoPubMedANKHD1-EIF4EBP3
iHOPANKHD1-EIF4EBP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:11:20 CET 2017

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