ANKHD1 (ankyrin repeat and KH domain containing 1)

Identity

Other names	MASK
	VBARP
HGNC	ANKHD1
Location	5q31.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	ANKHD1   24714
Entrez_Gene	ANKHD1  54882  ankyrin repeat and KH domain containing 1
	Cards
GeneCards	ANKHD1
Ensembl	ANKHD1 [Search_View]   ENSG00000131503 [Gene_View]
Genatlas	ANKHD1
GeneLynx	ANKHD1
eGenome	ANKHD1
euGene	54882
	Genomic and cartography
GoldenPath	ANKHD1  -  5q31.3   chr5:139761613-139899625 +  5q31.3   [Description]    (hg18-March_2006)
Ensembl	ANKHD1 - 5q31.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ANKHD1
	Gene and transcription
Genbank	AF217646 [ ENTREZ ]
Genbank	AF258557 [ ENTREZ ]
Genbank	AF521882 [ ENTREZ ]
Genbank	AI870943 [ ENTREZ ]
Genbank	AK000295 [ ENTREZ ]
RefSeq	NM_017747 [ SRS ]    NM_017747 [ ENTREZ ]
RefSeq	NM_017978 [ SRS ]    NM_017978 [ ENTREZ ]
RefSeq	NM_024668 [ SRS ]    NM_024668 [ ENTREZ ]
RefSeq	AC_000048 [ SRS ]    AC_000048 [ ENTREZ ]
RefSeq	AC_000137 [ SRS ]    AC_000137 [ ENTREZ ]
RefSeq	NC_000005 [ SRS ]    NC_000005 [ ENTREZ ]
RefSeq	NT_029289 [ SRS ]    NT_029289 [ ENTREZ ]
RefSeq	NW_001838953 [ SRS ]    NW_001838953 [ ENTREZ ]
RefSeq	NW_922784 [ SRS ]    NW_922784 [ ENTREZ ]
AceView	ANKHD1 AceView - NCBI
Unigene	Hs.594084 [ SRS ]    Hs.594084 [ NCBI ]     HS594084 [ spliceNest ]
Fast-db	10810 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q7Z586 [ SRS]    Q7Z586 [ EXPASY ]     Q7Z586 [ INTERPRO ]     Q7Z586 [ UNIPROT ]
Prosite	PS50297 ANK_REP_REGION [ SRS ]    PS50297 ANK_REP_REGION [ Expasy ]
Prosite	PS50088 ANK_REPEAT [ SRS ]    PS50088 ANK_REPEAT [ Expasy ]
Interpro	IPR002110 ANK [ SRS ]    IPR002110 ANK [ EBI ]
CluSTr	Q7Z586
Pfam	PF00023 Ank [ SRS ]    PF00023 Ank [ Sanger ]    pfam00023 [ NCBI-CDD ]
Smart	SM00248 ANK [EMBL]
Blocks	Q7Z586
HPRD	16489
	Protein Interaction databases
DIP	Q7Z586
IntAct	Q7Z586
	Polymorphism : SNP, mutations, diseases
OMIM	610500    [ map ]
GENECLINICS	610500
SNP	ANKHD1 [dbSNP-NCBI]
SNP	NM_017747 [SNP-NCI]
SNP	NM_017978 [SNP-NCI]
SNP	NM_024668 [SNP-NCI]
SNP	ANKHD1 [GeneSNPs - Utah]  ANKHD1] [HGBASE - SRS]
HAPMAP	ANKHD1 [HAPMAP]
COSMIC	ANKHD1 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	ANKHD1
	General knowledge
Family Browser	ANKHD1 [UCSC Family Browser]
SOURCE	NM_017747
SOURCE	NM_017978
SOURCE	NM_024668
SMD	Hs.594084
SAGE	Hs.594084
GO	RNA binding [Amigo]  RNA binding
GO	protein binding [Amigo]  protein binding
GO	cytoplasm [Amigo]  cytoplasm
PubGene	ANKHD1
TreeFam	ANKHD1
CTD	54882 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ANKHD1 Related clones (RZPD - Berlin)
	PubMed
PubMed	11 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:00:10 2008