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ANKMY2 (ankyrin repeat and MYND domain containing 2)

Identity

Alias (NCBI)ZMYND20
HGNC (Hugo) ANKMY2
HGNC Alias symbDKFZP564O043
ZMYND20
LocusID (NCBI) 57037
Atlas_Id 54122
Location 7p21.1  [Link to chromosome band 7p21]
Location_base_pair Starts at 16599780 and ends at 16645754 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ANKMY2 (7p21.1) / ISPD (7p21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ANKMY2   25370
Cards
Entrez_Gene (NCBI)ANKMY2    ankyrin repeat and MYND domain containing 2
AliasesZMYND20
GeneCards (Weizmann)ANKMY2
Ensembl hg19 (Hinxton)ENSG00000106524 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000106524 [Gene_View]  ENSG00000106524 [Sequence]  chr7:16599780-16645754 [Contig_View]  ANKMY2 [Vega]
ICGC DataPortalENSG00000106524
TCGA cBioPortalANKMY2
AceView (NCBI)ANKMY2
Genatlas (Paris)ANKMY2
SOURCE (Princeton)ANKMY2
Genetics Home Reference (NIH)ANKMY2
Genomic and cartography
GoldenPath hg38 (UCSC)ANKMY2  -     chr7:16599780-16645754 -  7p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKMY2  -     7p21.1   [Description]    (hg19-Feb_2009)
GoldenPathANKMY2 - 7p21.1 [CytoView hg19]  ANKMY2 - 7p21.1 [CytoView hg38]
ImmunoBaseENSG00000106524
Genome Data Viewer NCBIANKMY2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK001389 AK001740 AK023704 AL050390 BC015453
RefSeq transcript (Entrez)NM_020319
Consensus coding sequences : CCDS (NCBI)ANKMY2
Gene ExpressionANKMY2 [ NCBI-GEO ]   ANKMY2 [ EBI - ARRAY_EXPRESS ]   ANKMY2 [ SEEK ]   ANKMY2 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKMY2 [ Firebrowse - Broad ]
GenevisibleExpression of ANKMY2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57037
GTEX Portal (Tissue expression)ANKMY2
Human Protein AtlasENSG00000106524-ANKMY2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IV38   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IV38  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IV38
PhosPhoSitePlusQ8IV38
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)    ZF_MYND_1 (PS01360)    ZF_MYND_2 (PS50865)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    Ankyrin_rpt-contain_sf    Znf_MYND   
Domain families : Pfam (Sanger)Ank_2 (PF12796)    zf-MYND (PF01753)   
Domain families : Pfam (NCBI)pfam12796    pfam01753   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKMY2
SuperfamilyQ8IV38
AlphaFold pdb e-kbQ8IV38   
Human Protein Atlas [tissue]ENSG00000106524-ANKMY2 [tissue]
HPRD12454
Protein Interaction databases
DIP (DOE-UCLA)Q8IV38
IntAct (EBI)Q8IV38
BioGRIDANKMY2
STRING (EMBL)ANKMY2
ZODIACANKMY2
Ontologies - Pathways
QuickGOQ8IV38
Ontology : AmiGOprotein binding  cilium  enzyme binding  metal ion binding  
Ontology : EGO-EBIprotein binding  cilium  enzyme binding  metal ion binding  
NDEx NetworkANKMY2
Atlas of Cancer Signalling NetworkANKMY2
Wikipedia pathwaysANKMY2
Orthology - Evolution
OrthoDB57037
GeneTree (enSembl)ENSG00000106524
Phylogenetic Trees/Animal Genes : TreeFamANKMY2
Homologs : HomoloGeneANKMY2
Homology/Alignments : Family Browser (UCSC)ANKMY2
Gene fusions - Rearrangements
Fusion : MitelmanANKMY2/ISPD [7p21.1/7p21.2]  
Fusion : QuiverANKMY2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKMY2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKMY2
dbVarANKMY2
ClinVarANKMY2
MonarchANKMY2
1000_GenomesANKMY2 
Exome Variant ServerANKMY2
GNOMAD BrowserENSG00000106524
Varsome BrowserANKMY2
ACMGANKMY2 variants
VarityQ8IV38
Genomic Variants (DGV)ANKMY2 [DGVbeta]
DECIPHERANKMY2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKMY2 
Mutations
ICGC Data PortalANKMY2 
TCGA Data PortalANKMY2 
Broad Tumor PortalANKMY2
OASIS PortalANKMY2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKMY2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DANKMY2
Mutations and Diseases : HGMDANKMY2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaANKMY2
DgiDB (Drug Gene Interaction Database)ANKMY2
DoCM (Curated mutations)ANKMY2
CIViC (Clinical Interpretations of Variants in Cancer)ANKMY2
Cancer3DANKMY2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETANKMY2
MedgenANKMY2
Genetic Testing Registry ANKMY2
NextProtQ8IV38 [Medical]
GENETestsANKMY2
Target ValidationANKMY2
Huge Navigator ANKMY2 [HugePedia]
ClinGenANKMY2
Clinical trials, drugs, therapy
MyCancerGenomeANKMY2
Protein Interactions : CTDANKMY2
Pharm GKB GenePA134893861
PharosQ8IV38
Clinical trialANKMY2
Miscellaneous
canSAR (ICR)ANKMY2
HarmonizomeANKMY2
DataMed IndexANKMY2
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXANKMY2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 14:59:22 CEST 2021

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