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ANKRA2 (ankyrin repeat family A member 2)

Identity

Alias (NCBI)ANKRA
HGNC (Hugo) ANKRA2
HGNC Previous nameankyrin repeat, family A (RFXANK-like), 2
LocusID (NCBI) 57763
Atlas_Id 60308
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 73552191 and ends at 73565639 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM232 (5q22.1)::ANKRA2 (5q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ANKRA2   13208
Cards
Entrez_Gene (NCBI)ANKRA2    ankyrin repeat family A member 2
AliasesANKRA
GeneCards (Weizmann)ANKRA2
Ensembl hg19 (Hinxton)ENSG00000164331 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164331 [Gene_View]  ENSG00000164331 [Sequence]  chr5:73552191-73565639 [Contig_View]  ANKRA2 [Vega]
ICGC DataPortalENSG00000164331
TCGA cBioPortalANKRA2
AceView (NCBI)ANKRA2
Genatlas (Paris)ANKRA2
SOURCE (Princeton)ANKRA2
Genetics Home Reference (NIH)ANKRA2
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRA2  -     chr5:73552191-73565639 -  5q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRA2  -     5q13.2   [Description]    (hg19-Feb_2009)
GoldenPathANKRA2 - 5q13.2 [CytoView hg19]  ANKRA2 - 5q13.2 [CytoView hg38]
ImmunoBaseENSG00000164331
Genome Data Viewer NCBIANKRA2 [Mapview hg19]  
OMIM605787   
Gene and transcription
Genbank (Entrez)AF251051 AF314032 AK022876 AL558295 BC012917
RefSeq transcript (Entrez)NM_023039
Consensus coding sequences : CCDS (NCBI)ANKRA2
Gene ExpressionANKRA2 [ NCBI-GEO ]   ANKRA2 [ EBI - ARRAY_EXPRESS ]   ANKRA2 [ SEEK ]   ANKRA2 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRA2 [ Firebrowse - Broad ]
GenevisibleExpression of ANKRA2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57763
GTEX Portal (Tissue expression)ANKRA2
Human Protein AtlasENSG00000164331-ANKRA2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H9E1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H9E1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H9E1
PhosPhoSitePlusQ9H9E1
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    Ankyrin_rpt-contain_sf   
Domain families : Pfam (Sanger)Ank (PF00023)    Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam00023    pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKRA2
PDB (RSDB)3SO8    3V2O    3V2X    3V31    4LG6    4QQI   
PDB Europe3SO8    3V2O    3V2X    3V31    4LG6    4QQI   
PDB (PDBSum)3SO8    3V2O    3V2X    3V31    4LG6    4QQI   
PDB (IMB)3SO8    3V2O    3V2X    3V31    4LG6    4QQI   
Structural Biology KnowledgeBase3SO8    3V2O    3V2X    3V31    4LG6    4QQI   
SCOP (Structural Classification of Proteins)3SO8    3V2O    3V2X    3V31    4LG6    4QQI   
CATH (Classification of proteins structures)3SO8    3V2O    3V2X    3V31    4LG6    4QQI   
SuperfamilyQ9H9E1
AlphaFold pdb e-kbQ9H9E1   
Human Protein Atlas [tissue]ENSG00000164331-ANKRA2 [tissue]
HPRD12044
Protein Interaction databases
DIP (DOE-UCLA)Q9H9E1
IntAct (EBI)Q9H9E1
BioGRIDANKRA2
STRING (EMBL)ANKRA2
ZODIACANKRA2
Ontologies - Pathways
QuickGOQ9H9E1
Ontology : AmiGOprotein binding  nucleus  cytosol  cytoskeleton  regulation of gene expression  membrane  protein kinase binding  ubiquitin protein ligase binding  protein-containing complex  histone deacetylase binding  histone deacetylase binding  regulation of protein-containing complex assembly  low-density lipoprotein particle receptor binding  
Ontology : EGO-EBIprotein binding  nucleus  cytosol  cytoskeleton  regulation of gene expression  membrane  protein kinase binding  ubiquitin protein ligase binding  protein-containing complex  histone deacetylase binding  histone deacetylase binding  regulation of protein-containing complex assembly  low-density lipoprotein particle receptor binding  
NDEx NetworkANKRA2
Atlas of Cancer Signalling NetworkANKRA2
Wikipedia pathwaysANKRA2
Orthology - Evolution
OrthoDB57763
GeneTree (enSembl)ENSG00000164331
Phylogenetic Trees/Animal Genes : TreeFamANKRA2
Homologs : HomoloGeneANKRA2
Homology/Alignments : Family Browser (UCSC)ANKRA2
Gene fusions - Rearrangements
Fusion : QuiverANKRA2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRA2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRA2
dbVarANKRA2
ClinVarANKRA2
MonarchANKRA2
1000_GenomesANKRA2 
Exome Variant ServerANKRA2
GNOMAD BrowserENSG00000164331
Varsome BrowserANKRA2
ACMGANKRA2 variants
VarityQ9H9E1
Genomic Variants (DGV)ANKRA2 [DGVbeta]
DECIPHERANKRA2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRA2 
Mutations
ICGC Data PortalANKRA2 
TCGA Data PortalANKRA2 
Broad Tumor PortalANKRA2
OASIS PortalANKRA2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKRA2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DANKRA2
Mutations and Diseases : HGMDANKRA2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaANKRA2
DgiDB (Drug Gene Interaction Database)ANKRA2
DoCM (Curated mutations)ANKRA2
CIViC (Clinical Interpretations of Variants in Cancer)ANKRA2
Cancer3DANKRA2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605787   
Orphanet
DisGeNETANKRA2
MedgenANKRA2
Genetic Testing Registry ANKRA2
NextProtQ9H9E1 [Medical]
GENETestsANKRA2
Target ValidationANKRA2
Huge Navigator ANKRA2 [HugePedia]
ClinGenANKRA2
Clinical trials, drugs, therapy
MyCancerGenomeANKRA2
Protein Interactions : CTDANKRA2
Pharm GKB GenePA24803
PharosQ9H9E1
Clinical trialANKRA2
Miscellaneous
canSAR (ICR)ANKRA2
HarmonizomeANKRA2
ARCHS4ANKRA2
DataMed IndexANKRA2
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXANKRA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 18:44:32 CET 2022

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