Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ANKRD17 (ankyrin repeat domain 17)

Identity

Alias (NCBI)GTAR
MASK2
NY-BR-16
HGNC (Hugo) ANKRD17
HGNC Alias symbGTAR
KIAA0697
FLJ22206
NY-BR-16
MASK2
LocusID (NCBI) 26057
Atlas_Id 646
Location 4q13.3  [Link to chromosome band 4q13]
Location_base_pair Starts at 73073376 and ends at 73258798 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ANKRD17 (4q13.3) / ANKRD17 (4q13.3)ANKRD17 (4q13.3) / CD47 (3q13.12)ANKRD17 (4q13.3) / HS3ST1 (4p15.33)
ANKRD17 (4q13.3) / RPRD1B (20q11.23)ANKRD17 (4q13.3) / SQRDL (15q21.1)ANKRD17 (4q13.3) / WDFY3 (4q21.23)
GPM6A (4q34.2) / ANKRD17 (4q13.3)NIPBL (5p13.2) / ANKRD17 (4q13.3)RPRD1B (20q11.23) / ANKRD17 (4q13.3)
SETD4 (21q22.12) / ANKRD17 (4q13.3)SLC44A4 (6p21.33) / ANKRD17 (4q13.3)ANKRD17 4q13.3 / RPRD1B 20q11.23
ANKRD17 4q13.3 / SQRDL 15q21.1ANKRD17 4q13.3 / WDFY3 4q21.23NIPBL 5p13.2 / ANKRD17 4q13.3
RPRD1B 20q11.23 / ANKRD17 4q13.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ANKRD17   23575
Cards
Entrez_Gene (NCBI)ANKRD17    ankyrin repeat domain 17
AliasesGTAR; MASK2; NY-BR-16
GeneCards (Weizmann)ANKRD17
Ensembl hg19 (Hinxton)ENSG00000132466 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132466 [Gene_View]  ENSG00000132466 [Sequence]  chr4:73073376-73258798 [Contig_View]  ANKRD17 [Vega]
ICGC DataPortalENSG00000132466
TCGA cBioPortalANKRD17
AceView (NCBI)ANKRD17
Genatlas (Paris)ANKRD17
SOURCE (Princeton)ANKRD17
Genetics Home Reference (NIH)ANKRD17
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD17  -     chr4:73073376-73258798 -  4q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD17  -     4q13.3   [Description]    (hg19-Feb_2009)
GoldenPathANKRD17 - 4q13.3 [CytoView hg19]  ANKRD17 - 4q13.3 [CytoView hg38]
ImmunoBaseENSG00000132466
Genome Data Viewer NCBIANKRD17 [Mapview hg19]  
OMIM615929   
Gene and transcription
Genbank (Entrez)AB014597 AF308285 AI016364 AI680274 AK025859
RefSeq transcript (Entrez)NM_001286771 NM_015574 NM_032217 NM_198889
Consensus coding sequences : CCDS (NCBI)ANKRD17
Gene ExpressionANKRD17 [ NCBI-GEO ]   ANKRD17 [ EBI - ARRAY_EXPRESS ]   ANKRD17 [ SEEK ]   ANKRD17 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD17 [ Firebrowse - Broad ]
GenevisibleExpression of ANKRD17 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26057
GTEX Portal (Tissue expression)ANKRD17
Human Protein AtlasENSG00000132466-ANKRD17 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ANKRD17
Human Protein Atlas [tissue]ENSG00000132466-ANKRD17 [tissue]
HPRD10648
Protein Interaction databases
BioGRIDANKRD17
STRING (EMBL)ANKRD17
ZODIACANKRD17
Ontologies - Pathways
Litterature
PubMed66 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXANKRD17
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 14:59:23 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.