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ANKRD2 (ankyrin repeat domain 2)

Identity

Alias (NCBI)ARPP
HGNC (Hugo) ANKRD2
HGNC Alias symbARPP
HGNC Previous nameankyrin repeat domain 2 (stretch responsive muscle)
LocusID (NCBI) 26287
Atlas_Id 46185
Location 10q24.2  [Link to chromosome band 10q24]
Location_base_pair Starts at 97572503 and ends at 97583884 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ANKRD2   495
Cards
Entrez_Gene (NCBI)ANKRD2    ankyrin repeat domain 2
AliasesARPP
GeneCards (Weizmann)ANKRD2
Ensembl hg19 (Hinxton)ENSG00000165887 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165887 [Gene_View]  ENSG00000165887 [Sequence]  chr10:97572503-97583884 [Contig_View]  ANKRD2 [Vega]
ICGC DataPortalENSG00000165887
TCGA cBioPortalANKRD2
AceView (NCBI)ANKRD2
Genatlas (Paris)ANKRD2
SOURCE (Princeton)ANKRD2
Genetics Home Reference (NIH)ANKRD2
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD2  -     chr10:97572503-97583884 +  10q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD2  -     10q24.2   [Description]    (hg19-Feb_2009)
GoldenPathANKRD2 - 10q24.2 [CytoView hg19]  ANKRD2 - 10q24.2 [CytoView hg38]
ImmunoBaseENSG00000165887
Genome Data Viewer NCBIANKRD2 [Mapview hg19]  
OMIM610734   
Gene and transcription
Genbank (Entrez)AB058599 AJ249975 AJ304805 AJ346356 AJ583444
RefSeq transcript (Entrez)NM_001129981 NM_001291218 NM_001291219 NM_001346793 NM_020349
Consensus coding sequences : CCDS (NCBI)ANKRD2
Gene ExpressionANKRD2 [ NCBI-GEO ]   ANKRD2 [ EBI - ARRAY_EXPRESS ]   ANKRD2 [ SEEK ]   ANKRD2 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD2 [ Firebrowse - Broad ]
GenevisibleExpression of ANKRD2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26287
GTEX Portal (Tissue expression)ANKRD2
Human Protein AtlasENSG00000165887-ANKRD2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9GZV1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9GZV1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9GZV1
PhosPhoSitePlusQ9GZV1
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    Ankyrin_rpt-contain_sf   
Domain families : Pfam (Sanger)Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKRD2
SuperfamilyQ9GZV1
AlphaFold pdb e-kbQ9GZV1   
Human Protein Atlas [tissue]ENSG00000165887-ANKRD2 [tissue]
HPRD12460
Protein Interaction databases
DIP (DOE-UCLA)Q9GZV1
IntAct (EBI)Q9GZV1
BioGRIDANKRD2
STRING (EMBL)ANKRD2
ZODIACANKRD2
Ontologies - Pathways
QuickGOQ9GZV1
Ontology : AmiGOnegative regulation of transcription by RNA polymerase II  euchromatin  protein binding  nucleus  nucleus  cytosol  regulation of transcription by RNA polymerase II  muscle contraction  muscle organ development  structural constituent of muscle  PML body  I band  intracellular membrane-bounded organelle  protein kinase B binding  regulation of transcription from RNA polymerase II promoter in response to oxidative stress  negative regulation of myoblast differentiation  RNA polymerase II-specific DNA-binding transcription factor binding  RNA polymerase II-specific DNA-binding transcription factor binding  
Ontology : EGO-EBInegative regulation of transcription by RNA polymerase II  euchromatin  protein binding  nucleus  nucleus  cytosol  regulation of transcription by RNA polymerase II  muscle contraction  muscle organ development  structural constituent of muscle  PML body  I band  intracellular membrane-bounded organelle  protein kinase B binding  regulation of transcription from RNA polymerase II promoter in response to oxidative stress  negative regulation of myoblast differentiation  RNA polymerase II-specific DNA-binding transcription factor binding  RNA polymerase II-specific DNA-binding transcription factor binding  
NDEx NetworkANKRD2
Atlas of Cancer Signalling NetworkANKRD2
Wikipedia pathwaysANKRD2
Orthology - Evolution
OrthoDB26287
GeneTree (enSembl)ENSG00000165887
Phylogenetic Trees/Animal Genes : TreeFamANKRD2
Homologs : HomoloGeneANKRD2
Homology/Alignments : Family Browser (UCSC)ANKRD2
Gene fusions - Rearrangements
Fusion : QuiverANKRD2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD2
dbVarANKRD2
ClinVarANKRD2
MonarchANKRD2
1000_GenomesANKRD2 
Exome Variant ServerANKRD2
GNOMAD BrowserENSG00000165887
Varsome BrowserANKRD2
ACMGANKRD2 variants
VarityQ9GZV1
Genomic Variants (DGV)ANKRD2 [DGVbeta]
DECIPHERANKRD2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRD2 
Mutations
ICGC Data PortalANKRD2 
TCGA Data PortalANKRD2 
Broad Tumor PortalANKRD2
OASIS PortalANKRD2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKRD2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DANKRD2
Mutations and Diseases : HGMDANKRD2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaANKRD2
DgiDB (Drug Gene Interaction Database)ANKRD2
DoCM (Curated mutations)ANKRD2
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD2
Cancer3DANKRD2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610734   
Orphanet
DisGeNETANKRD2
MedgenANKRD2
Genetic Testing Registry ANKRD2
NextProtQ9GZV1 [Medical]
GENETestsANKRD2
Target ValidationANKRD2
Huge Navigator ANKRD2 [HugePedia]
ClinGenANKRD2
Clinical trials, drugs, therapy
MyCancerGenomeANKRD2
Protein Interactions : CTDANKRD2
Pharm GKB GenePA24804
PharosQ9GZV1
Clinical trialANKRD2
Miscellaneous
canSAR (ICR)ANKRD2
HarmonizomeANKRD2
DataMed IndexANKRD2
Probes
Litterature
PubMed33 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXANKRD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 14:59:24 CEST 2021

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