Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ANKRD20A11P (ankyrin repeat domain 20 family member A11, pseudogene)

Identity

Alias_namesC21orf81
chromosome 21 open reading frame 81
ankyrin repeat domain 20 family, member A11, pseudogene
Other alias
HGNC (Hugo) ANKRD20A11P
LocusID (NCBI) 391267
Atlas_Id 60321
Location 21q11.2  [Link to chromosome band 21q11]
Location_base_pair Starts at 13943776 and ends at 13980439 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD20A11P   42024
Cards
Entrez_Gene (NCBI)ANKRD20A11P  391267  ankyrin repeat domain 20 family member A11, pseudogene
AliasesC21orf81
GeneCards (Weizmann)ANKRD20A11P
Ensembl hg19 (Hinxton)ENSG00000215559 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000215559 [Gene_View]  chr21:13943776-13980439 [Contig_View]  ANKRD20A11P [Vega]
ICGC DataPortalENSG00000215559
TCGA cBioPortalANKRD20A11P
AceView (NCBI)ANKRD20A11P
Genatlas (Paris)ANKRD20A11P
WikiGenes391267
SOURCE (Princeton)ANKRD20A11P
Genetics Home Reference (NIH)ANKRD20A11P
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD20A11P  -     chr21:13943776-13980439 -  21q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD20A11P  -     21q11.2   [Description]    (hg19-Feb_2009)
EnsemblANKRD20A11P - 21q11.2 [CytoView hg19]  ANKRD20A11P - 21q11.2 [CytoView hg38]
Mapping of homologs : NCBIANKRD20A11P [Mapview hg19]  ANKRD20A11P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF426257 BC036580 BC043199 BC063278
RefSeq transcript (Entrez)NM_153750
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD20A11P
Cluster EST : UnigeneHs.364456 [ NCBI ]
CGAP (NCI)Hs.364456
Alternative Splicing GalleryENSG00000215559
Gene ExpressionANKRD20A11P [ NCBI-GEO ]   ANKRD20A11P [ EBI - ARRAY_EXPRESS ]   ANKRD20A11P [ SEEK ]   ANKRD20A11P [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD20A11P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)391267
GTEX Portal (Tissue expression)ANKRD20A11P
Human Protein AtlasENSG00000215559-ANKRD20A11P [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ANKRD20A11P
DMDM Disease mutations391267
Blocks (Seattle)ANKRD20A11P
Human Protein Atlas [tissue]ENSG00000215559-ANKRD20A11P [tissue]
IPIIPI00183401   IPI00873553   
Protein Interaction databases
FunCoupENSG00000215559
BioGRIDANKRD20A11P
STRING (EMBL)ANKRD20A11P
ZODIACANKRD20A11P
Ontologies - Pathways
Huge Navigator ANKRD20A11P [HugePedia]
snp3D : Map Gene to Disease391267
BioCentury BCIQANKRD20A11P
ClinGenANKRD20A11P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD391267
Chemical/Pharm GKB GenePA25868
Clinical trialANKRD20A11P
Miscellaneous
canSAR (ICR)ANKRD20A11P (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD20A11P
EVEXANKRD20A11P
GoPubMedANKRD20A11P
iHOPANKRD20A11P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:42:32 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.