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ANKRD20A12P (ankyrin repeat domain 20 family member A12, pseudogene)

Identity

Alias_namesankyrin repeat domain 20 family, member A12, pseudogene
Other alias-
HGNC (Hugo) ANKRD20A12P
LocusID (NCBI) 100874392
Atlas_Id 60322
Location -  [Link to chromosome band ]
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ANKRD20A12P   43603
Cards
Entrez_Gene (NCBI)ANKRD20A12P  100874392  ankyrin repeat domain 20 family member A12, pseudogene
Aliases
GeneCards (Weizmann)ANKRD20A12P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  ANKRD20A12P [Vega]
TCGA cBioPortalANKRD20A12P
AceView (NCBI)ANKRD20A12P
Genatlas (Paris)ANKRD20A12P
WikiGenes100874392
SOURCE (Princeton)ANKRD20A12P
Genetics Home Reference (NIH)ANKRD20A12P
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD20A12P  -  
GoldenPath hg19 (UCSC)ANKRD20A12P  -  
EnsemblANKRD20A12P - [CytoView hg19]  ANKRD20A12P - [CytoView hg38]
Mapping of homologs : NCBIANKRD20A12P [Mapview hg19]  ANKRD20A12P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090412 BC022380
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NT_113793
Consensus coding sequences : CCDS (NCBI)ANKRD20A12P
Cluster EST : UnigeneHs.648245 [ NCBI ]
CGAP (NCI)Hs.648245
Gene ExpressionANKRD20A12P [ NCBI-GEO ]   ANKRD20A12P [ EBI - ARRAY_EXPRESS ]   ANKRD20A12P [ SEEK ]   ANKRD20A12P [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD20A12P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100874392
GTEX Portal (Tissue expression)ANKRD20A12P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NF67   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NF67  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NF67
Splice isoforms : SwissVarQ8NF67
PhosPhoSitePlusQ8NF67
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ANKRD20A12P
DMDM Disease mutations100874392
Blocks (Seattle)ANKRD20A12P
SuperfamilyQ8NF67
Peptide AtlasQ8NF67
Protein Interaction databases
DIP (DOE-UCLA)Q8NF67
IntAct (EBI)Q8NF67
BioGRIDANKRD20A12P
STRING (EMBL)ANKRD20A12P
ZODIACANKRD20A12P
Ontologies - Pathways
QuickGOQ8NF67
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkANKRD20A12P
Atlas of Cancer Signalling NetworkANKRD20A12P
Wikipedia pathwaysANKRD20A12P
Orthology - Evolution
OrthoDB100874392
Phylogenetic Trees/Animal Genes : TreeFamANKRD20A12P
HOVERGENQ8NF67
HOGENOMQ8NF67
Homologs : HomoloGeneANKRD20A12P
Homology/Alignments : Family Browser (UCSC)ANKRD20A12P
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD20A12P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD20A12P
dbVarANKRD20A12P
ClinVarANKRD20A12P
1000_GenomesANKRD20A12P 
Exome Variant ServerANKRD20A12P
ExAC (Exome Aggregation Consortium)ANKRD20A12P (select the gene name)
Genetic variants : HAPMAP100874392
Genomic Variants (DGV)ANKRD20A12P [DGVbeta]
DECIPHERANKRD20A12P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRD20A12P 
Mutations
ICGC Data PortalANKRD20A12P 
TCGA Data PortalANKRD20A12P 
Broad Tumor PortalANKRD20A12P
OASIS PortalANKRD20A12P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDANKRD20A12P
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANKRD20A12P
DgiDB (Drug Gene Interaction Database)ANKRD20A12P
DoCM (Curated mutations)ANKRD20A12P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD20A12P (select a term)
intoGenANKRD20A12P
Cancer3DANKRD20A12P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenANKRD20A12P
Genetic Testing Registry ANKRD20A12P
NextProtQ8NF67 [Medical]
TSGene100874392
GENETestsANKRD20A12P
Target ValidationANKRD20A12P
Huge Navigator ANKRD20A12P [HugePedia]
snp3D : Map Gene to Disease100874392
BioCentury BCIQANKRD20A12P
ClinGenANKRD20A12P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874392
Clinical trialANKRD20A12P
Miscellaneous
canSAR (ICR)ANKRD20A12P (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD20A12P
EVEXANKRD20A12P
GoPubMedANKRD20A12P
iHOPANKRD20A12P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:20 CEST 2017

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