Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ANKRD22 (ankyrin repeat domain 22)

Identity

Alias_symbol (synonym)MGC22805
Other alias-
HGNC (Hugo) ANKRD22
LocusID (NCBI) 118932
Atlas_Id 60330
Location 10q23.31  [Link to chromosome band 10q23]
Location_base_pair Starts at 88819902 and ends at 88851975 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD22   28321
Cards
Entrez_Gene (NCBI)ANKRD22  118932  ankyrin repeat domain 22
Aliases
GeneCards (Weizmann)ANKRD22
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:88819902-88851975 [Contig_View]  ANKRD22 [Vega]
TCGA cBioPortalANKRD22
AceView (NCBI)ANKRD22
Genatlas (Paris)ANKRD22
WikiGenes118932
SOURCE (Princeton)ANKRD22
Genetics Home Reference (NIH)ANKRD22
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD22  -     chr10:88819902-88851975 -  10q23.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD22  -     10q23.31   [Description]    (hg19-Feb_2009)
EnsemblANKRD22 - 10q23.31 [CytoView hg19]  ANKRD22 - 10q23.31 [CytoView hg38]
Mapping of homologs : NCBIANKRD22 [Mapview hg19]  ANKRD22 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK313969 BC021671 BM785517 DA672161 HQ448728
RefSeq transcript (Entrez)NM_144590
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD22
Cluster EST : UnigeneHs.217484 [ NCBI ]
CGAP (NCI)Hs.217484
Gene ExpressionANKRD22 [ NCBI-GEO ]   ANKRD22 [ EBI - ARRAY_EXPRESS ]   ANKRD22 [ SEEK ]   ANKRD22 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD22 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)118932
GTEX Portal (Tissue expression)ANKRD22
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5VYY1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5VYY1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5VYY1
Splice isoforms : SwissVarQ5VYY1
PhosPhoSitePlusQ5VYY1
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom   
Domain families : Pfam (Sanger)Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKRD22
DMDM Disease mutations118932
Blocks (Seattle)ANKRD22
SuperfamilyQ5VYY1
Peptide AtlasQ5VYY1
HPRD12461
IPIIPI00102803   
Protein Interaction databases
DIP (DOE-UCLA)Q5VYY1
IntAct (EBI)Q5VYY1
BioGRIDANKRD22
STRING (EMBL)ANKRD22
ZODIACANKRD22
Ontologies - Pathways
QuickGOQ5VYY1
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkANKRD22
Atlas of Cancer Signalling NetworkANKRD22
Wikipedia pathwaysANKRD22
Orthology - Evolution
OrthoDB118932
Phylogenetic Trees/Animal Genes : TreeFamANKRD22
HOVERGENQ5VYY1
HOGENOMQ5VYY1
Homologs : HomoloGeneANKRD22
Homology/Alignments : Family Browser (UCSC)ANKRD22
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD22 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD22
dbVarANKRD22
ClinVarANKRD22
1000_GenomesANKRD22 
Exome Variant ServerANKRD22
ExAC (Exome Aggregation Consortium)ANKRD22 (select the gene name)
Genetic variants : HAPMAP118932
Genomic Variants (DGV)ANKRD22 [DGVbeta]
DECIPHERANKRD22 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRD22 
Mutations
ICGC Data PortalANKRD22 
TCGA Data PortalANKRD22 
Broad Tumor PortalANKRD22
OASIS PortalANKRD22 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKRD22  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANKRD22
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANKRD22
DgiDB (Drug Gene Interaction Database)ANKRD22
DoCM (Curated mutations)ANKRD22 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD22 (select a term)
intoGenANKRD22
Cancer3DANKRD22(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenANKRD22
Genetic Testing Registry ANKRD22
NextProtQ5VYY1 [Medical]
TSGene118932
GENETestsANKRD22
Target ValidationANKRD22
Huge Navigator ANKRD22 [HugePedia]
snp3D : Map Gene to Disease118932
BioCentury BCIQANKRD22
ClinGenANKRD22
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD118932
Chemical/Pharm GKB GenePA134954600
Clinical trialANKRD22
Miscellaneous
canSAR (ICR)ANKRD22 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD22
EVEXANKRD22
GoPubMedANKRD22
iHOPANKRD22
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:38:11 CEST 2017

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