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ANKRD24 (ankyrin repeat domain 24)

Identity

Alias_symbol (synonym)KIAA1981
Other alias-
HGNC (Hugo) ANKRD24
LocusID (NCBI) 170961
Atlas_Id 60331
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 4183354 and ends at 4224814 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SH3GL1 (19p13.3) / ANKRD24 (19p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD24   29424
Cards
Entrez_Gene (NCBI)ANKRD24  170961  ankyrin repeat domain 24
Aliases
GeneCards (Weizmann)ANKRD24
Ensembl hg19 (Hinxton)ENSG00000089847 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000089847 [Gene_View]  chr19:4183354-4224814 [Contig_View]  ANKRD24 [Vega]
ICGC DataPortalENSG00000089847
TCGA cBioPortalANKRD24
AceView (NCBI)ANKRD24
Genatlas (Paris)ANKRD24
WikiGenes170961
SOURCE (Princeton)ANKRD24
Genetics Home Reference (NIH)ANKRD24
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD24  -     chr19:4183354-4224814 +  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD24  -     19p13.3   [Description]    (hg19-Feb_2009)
EnsemblANKRD24 - 19p13.3 [CytoView hg19]  ANKRD24 - 19p13.3 [CytoView hg38]
Mapping of homologs : NCBIANKRD24 [Mapview hg19]  ANKRD24 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB075861 BC028236 BI914435 BX117359 BX359277
RefSeq transcript (Entrez)NM_133475
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD24
Cluster EST : UnigeneHs.197872 [ NCBI ]
CGAP (NCI)Hs.197872
Alternative Splicing GalleryENSG00000089847
Gene ExpressionANKRD24 [ NCBI-GEO ]   ANKRD24 [ EBI - ARRAY_EXPRESS ]   ANKRD24 [ SEEK ]   ANKRD24 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD24 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)170961
GTEX Portal (Tissue expression)ANKRD24
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TF21   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TF21  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TF21
Splice isoforms : SwissVarQ8TF21
PhosPhoSitePlusQ8TF21
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom   
Domain families : Pfam (Sanger)Ank (PF00023)    Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam00023    pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKRD24
DMDM Disease mutations170961
Blocks (Seattle)ANKRD24
SuperfamilyQ8TF21
Human Protein AtlasENSG00000089847
Peptide AtlasQ8TF21
IPIIPI00291809   IPI00889539   IPI00307770   
Protein Interaction databases
DIP (DOE-UCLA)Q8TF21
IntAct (EBI)Q8TF21
FunCoupENSG00000089847
BioGRIDANKRD24
STRING (EMBL)ANKRD24
ZODIACANKRD24
Ontologies - Pathways
QuickGOQ8TF21
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkANKRD24
Atlas of Cancer Signalling NetworkANKRD24
Wikipedia pathwaysANKRD24
Orthology - Evolution
OrthoDB170961
GeneTree (enSembl)ENSG00000089847
Phylogenetic Trees/Animal Genes : TreeFamANKRD24
HOVERGENQ8TF21
HOGENOMQ8TF21
Homologs : HomoloGeneANKRD24
Homology/Alignments : Family Browser (UCSC)ANKRD24
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD24 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD24
dbVarANKRD24
ClinVarANKRD24
1000_GenomesANKRD24 
Exome Variant ServerANKRD24
ExAC (Exome Aggregation Consortium)ANKRD24 (select the gene name)
Genetic variants : HAPMAP170961
Genomic Variants (DGV)ANKRD24 [DGVbeta]
DECIPHERANKRD24 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRD24 
Mutations
ICGC Data PortalANKRD24 
TCGA Data PortalANKRD24 
Broad Tumor PortalANKRD24
OASIS PortalANKRD24 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKRD24  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANKRD24
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANKRD24
DgiDB (Drug Gene Interaction Database)ANKRD24
DoCM (Curated mutations)ANKRD24 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD24 (select a term)
intoGenANKRD24
Cancer3DANKRD24(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenANKRD24
Genetic Testing Registry ANKRD24
NextProtQ8TF21 [Medical]
TSGene170961
GENETestsANKRD24
Target ValidationANKRD24
Huge Navigator ANKRD24 [HugePedia]
snp3D : Map Gene to Disease170961
BioCentury BCIQANKRD24
ClinGenANKRD24
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD170961
Chemical/Pharm GKB GenePA134937612
Clinical trialANKRD24
Miscellaneous
canSAR (ICR)ANKRD24 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD24
EVEXANKRD24
GoPubMedANKRD24
iHOPANKRD24
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:38:11 CEST 2017

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