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ANKRD26 (ankyrin repeat domain 26)

Identity

Alias_namesTHC2
thrombocytopenia 2 (autosomal dominant)
Alias_symbol (synonym)KIAA1074
Other aliasbA145E8.1
HGNC (Hugo) ANKRD26
LocusID (NCBI) 22852
Atlas_Id 55967
Location 10p12.1  [Link to chromosome band 10p12]
Location_base_pair Starts at 27004116 and ends at 27100498 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ANKRD26 (10p12.1) / ANKRD26 (10p12.1)CALM3 (19q13.32) / ANKRD26 (10p12.1)FAM171A1 (10p13) / ANKRD26 (10p12.1)
ZNHIT6 (1p22.3) / ANKRD26 (10p12.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD26   29186
LRG (Locus Reference Genomic)LRG_605
Cards
Entrez_Gene (NCBI)ANKRD26  22852  ankyrin repeat domain 26
AliasesTHC2; bA145E8.1
GeneCards (Weizmann)ANKRD26
Ensembl hg19 (Hinxton)ENSG00000107890 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000107890 [Gene_View]  chr10:27004116-27100498 [Contig_View]  ANKRD26 [Vega]
ICGC DataPortalENSG00000107890
TCGA cBioPortalANKRD26
AceView (NCBI)ANKRD26
Genatlas (Paris)ANKRD26
WikiGenes22852
SOURCE (Princeton)ANKRD26
Genetics Home Reference (NIH)ANKRD26
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD26  -     chr10:27004116-27100498 -  10p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD26  -     10p12.1   [Description]    (hg19-Feb_2009)
EnsemblANKRD26 - 10p12.1 [CytoView hg19]  ANKRD26 - 10p12.1 [CytoView hg38]
Mapping of homologs : NCBIANKRD26 [Mapview hg19]  ANKRD26 [Mapview hg38]
OMIM188000   610855   
Gene and transcription
Genbank (Entrez)AB028997 AK001137 AK128577 AL137351 AL162063
RefSeq transcript (Entrez)NM_001256053 NM_014915
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD26
Cluster EST : UnigeneHs.361041 [ NCBI ]
CGAP (NCI)Hs.361041
Alternative Splicing GalleryENSG00000107890
Gene ExpressionANKRD26 [ NCBI-GEO ]   ANKRD26 [ EBI - ARRAY_EXPRESS ]   ANKRD26 [ SEEK ]   ANKRD26 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22852
GTEX Portal (Tissue expression)ANKRD26
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UPS8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UPS8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UPS8
Splice isoforms : SwissVarQ9UPS8
PhosPhoSitePlusQ9UPS8
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    DUF3496   
Domain families : Pfam (Sanger)Ank (PF00023)    Ank_2 (PF12796)    DUF3496 (PF12001)   
Domain families : Pfam (NCBI)pfam00023    pfam12796    pfam12001   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKRD26
DMDM Disease mutations22852
Blocks (Seattle)ANKRD26
SuperfamilyQ9UPS8
Human Protein AtlasENSG00000107890
Peptide AtlasQ9UPS8
HPRD16491
IPIIPI00760833   IPI00007193   IPI00793360   IPI00828091   IPI00411632   
Protein Interaction databases
DIP (DOE-UCLA)Q9UPS8
IntAct (EBI)Q9UPS8
FunCoupENSG00000107890
BioGRIDANKRD26
STRING (EMBL)ANKRD26
ZODIACANKRD26
Ontologies - Pathways
QuickGOQ9UPS8
Ontology : AmiGOcentrosome  
Ontology : EGO-EBIcentrosome  
NDEx NetworkANKRD26
Atlas of Cancer Signalling NetworkANKRD26
Wikipedia pathwaysANKRD26
Orthology - Evolution
OrthoDB22852
GeneTree (enSembl)ENSG00000107890
Phylogenetic Trees/Animal Genes : TreeFamANKRD26
HOVERGENQ9UPS8
HOGENOMQ9UPS8
Homologs : HomoloGeneANKRD26
Homology/Alignments : Family Browser (UCSC)ANKRD26
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD26 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD26
dbVarANKRD26
ClinVarANKRD26
1000_GenomesANKRD26 
Exome Variant ServerANKRD26
ExAC (Exome Aggregation Consortium)ANKRD26 (select the gene name)
Genetic variants : HAPMAP22852
Genomic Variants (DGV)ANKRD26 [DGVbeta]
DECIPHERANKRD26 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRD26 
Mutations
ICGC Data PortalANKRD26 
TCGA Data PortalANKRD26 
Broad Tumor PortalANKRD26
OASIS PortalANKRD26 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKRD26  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANKRD26
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch ANKRD26
DgiDB (Drug Gene Interaction Database)ANKRD26
DoCM (Curated mutations)ANKRD26 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD26 (select a term)
intoGenANKRD26
Cancer3DANKRD26(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM188000    610855   
Orphanet17789   
MedgenANKRD26
Genetic Testing Registry ANKRD26
NextProtQ9UPS8 [Medical]
TSGene22852
GENETestsANKRD26
Target ValidationANKRD26
Huge Navigator ANKRD26 [HugePedia]
snp3D : Map Gene to Disease22852
BioCentury BCIQANKRD26
ClinGenANKRD26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD22852
Chemical/Pharm GKB GenePA134926710
Clinical trialANKRD26
Miscellaneous
canSAR (ICR)ANKRD26 (select the gene name)
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD26
EVEXANKRD26
GoPubMedANKRD26
iHOPANKRD26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:46:47 CEST 2017

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