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ANKRD30BP2 (ankyrin repeat domain 30B pseudogene 2)

Identity

Alias_namesC21orf99
chromosome 21 open reading frame 99
Alias_symbol (synonym)CT85
CTSP-1
Other aliasCTSP1
HGNC (Hugo) ANKRD30BP2
LocusID (NCBI) 149992
Atlas_Id 51104
Location 21q11.2  [Link to chromosome band 21q11]
Location_base_pair Starts at 13042784 and ends at 13052011 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD30BP2   16620
Cards
Entrez_Gene (NCBI)ANKRD30BP2  149992  ankyrin repeat domain 30B pseudogene 2
AliasesC21orf99; CT85; CTSP-1; CTSP1
GeneCards (Weizmann)ANKRD30BP2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:13042784-13052011 [Contig_View]  ANKRD30BP2 [Vega]
TCGA cBioPortalANKRD30BP2
AceView (NCBI)ANKRD30BP2
Genatlas (Paris)ANKRD30BP2
WikiGenes149992
SOURCE (Princeton)ANKRD30BP2
Genetics Home Reference (NIH)ANKRD30BP2
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD30BP2  -     chr21:13042784-13052011 +  21q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD30BP2  -     21q11.2   [Description]    (hg19-Feb_2009)
EnsemblANKRD30BP2 - 21q11.2 [CytoView hg19]  ANKRD30BP2 - 21q11.2 [CytoView hg38]
Mapping of homologs : NCBIANKRD30BP2 [Mapview hg19]  ANKRD30BP2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF427490 BC036510 BC126176 BC126178 BC127901
RefSeq transcript (Entrez)NM_153773
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD30BP2
Cluster EST : UnigeneHs.579474 [ NCBI ]
CGAP (NCI)Hs.579474
Gene ExpressionANKRD30BP2 [ NCBI-GEO ]   ANKRD30BP2 [ EBI - ARRAY_EXPRESS ]   ANKRD30BP2 [ SEEK ]   ANKRD30BP2 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD30BP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)149992
GTEX Portal (Tissue expression)ANKRD30BP2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ANKRD30BP2
DMDM Disease mutations149992
Blocks (Seattle)ANKRD30BP2
HPRD10779
IPIIPI00976116   
Protein Interaction databases
BioGRIDANKRD30BP2
STRING (EMBL)ANKRD30BP2
ZODIACANKRD30BP2
Ontologies - Pathways
Huge Navigator ANKRD30BP2 [HugePedia]
snp3D : Map Gene to Disease149992
BioCentury BCIQANKRD30BP2
ClinGenANKRD30BP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD149992
Chemical/Pharm GKB GenePA134962599
Clinical trialANKRD30BP2
Miscellaneous
canSAR (ICR)ANKRD30BP2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD30BP2
EVEXANKRD30BP2
GoPubMedANKRD30BP2
iHOPANKRD30BP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:26:16 CET 2017

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