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ANKRD30BP3 (ankyrin repeat domain 30B pseudogene 3)

Identity

Alias (NCBI)-
HGNC (Hugo) ANKRD30BP3
LocusID (NCBI) 338579
Atlas_Id 60335
Location 10q11.21  [Link to chromosome band 10q11]
Location_base_pair Starts at 45154662 and ends at 45186041 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ANKRD30BP3   27873
Cards
Entrez_Gene (NCBI)ANKRD30BP3    ankyrin repeat domain 30B pseudogene 3
Aliases
GeneCards (Weizmann)ANKRD30BP3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:45154662-45186041 [Contig_View]  ANKRD30BP3 [Vega]
TCGA cBioPortalANKRD30BP3
AceView (NCBI)ANKRD30BP3
Genatlas (Paris)ANKRD30BP3
SOURCE (Princeton)ANKRD30BP3
Genetics Home Reference (NIH)ANKRD30BP3
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD30BP3  -     chr10:45154662-45186041 +  10q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD30BP3  -     10q11.21   [Description]    (hg19-Feb_2009)
GoldenPathANKRD30BP3 - 10q11.21 [CytoView hg19]  ANKRD30BP3 - 10q11.21 [CytoView hg38]
Genome Data Viewer NCBIANKRD30BP3 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK098688 BC031237 BC043208 OA985726
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD30BP3
Gene ExpressionANKRD30BP3 [ NCBI-GEO ]   ANKRD30BP3 [ EBI - ARRAY_EXPRESS ]   ANKRD30BP3 [ SEEK ]   ANKRD30BP3 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD30BP3 [ Firebrowse - Broad ]
GenevisibleExpression of ANKRD30BP3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)338579
GTEX Portal (Tissue expression)ANKRD30BP3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ANKRD30BP3
Protein Interaction databases
BioGRIDANKRD30BP3
STRING (EMBL)ANKRD30BP3
ZODIACANKRD30BP3
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXANKRD30BP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:42:06 CEST 2021

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