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ANKRD30BP3 (ankyrin repeat domain 30B pseudogene 3)

Identity

Other alias-
HGNC (Hugo) ANKRD30BP3
LocusID (NCBI) 338579
Atlas_Id 60335
Location 10q11.21  [Link to chromosome band 10q11]
Location_base_pair Starts at 45154662 and ends at 45186041 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD30BP3   27873
Cards
Entrez_Gene (NCBI)ANKRD30BP3  338579  ankyrin repeat domain 30B pseudogene 3
Aliases
GeneCards (Weizmann)ANKRD30BP3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:45154662-45186041 [Contig_View]  ANKRD30BP3 [Vega]
TCGA cBioPortalANKRD30BP3
AceView (NCBI)ANKRD30BP3
Genatlas (Paris)ANKRD30BP3
WikiGenes338579
SOURCE (Princeton)ANKRD30BP3
Genetics Home Reference (NIH)ANKRD30BP3
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD30BP3  -     chr10:45154662-45186041 +  10q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD30BP3  -     10q11.21   [Description]    (hg19-Feb_2009)
EnsemblANKRD30BP3 - 10q11.21 [CytoView hg19]  ANKRD30BP3 - 10q11.21 [CytoView hg38]
Mapping of homologs : NCBIANKRD30BP3 [Mapview hg19]  ANKRD30BP3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK098688 BC031237 BC043208
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD30BP3
Cluster EST : UnigeneHs.666134 [ NCBI ]
CGAP (NCI)Hs.666134
Gene ExpressionANKRD30BP3 [ NCBI-GEO ]   ANKRD30BP3 [ EBI - ARRAY_EXPRESS ]   ANKRD30BP3 [ SEEK ]   ANKRD30BP3 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD30BP3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)338579
GTEX Portal (Tissue expression)ANKRD30BP3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ANKRD30BP3
DMDM Disease mutations338579
Blocks (Seattle)ANKRD30BP3
IPIIPI00893395   IPI00167170   
Protein Interaction databases
BioGRIDANKRD30BP3
STRING (EMBL)ANKRD30BP3
ZODIACANKRD30BP3
Ontologies - Pathways
Huge Navigator ANKRD30BP3 [HugePedia]
snp3D : Map Gene to Disease338579
BioCentury BCIQANKRD30BP3
ClinGenANKRD30BP3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338579
Clinical trialANKRD30BP3
Miscellaneous
canSAR (ICR)ANKRD30BP3 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD30BP3
EVEXANKRD30BP3
GoPubMedANKRD30BP3
iHOPANKRD30BP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:18:38 CET 2017

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