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ANKRD31 (ankyrin repeat domain 31)

Identity

Alias_symbol (synonym)FLJ40191
Other alias-
HGNC (Hugo) ANKRD31
LocusID (NCBI) 256006
Atlas_Id 60336
Location 5q13.3  [Link to chromosome band 5q13]
Location_base_pair Starts at 75068297 and ends at 75236878 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FAM169A (5q13.3) / ANKRD31 (5q13.3)NDUFAF2 (5q12.1) / ANKRD31 (5q13.3)FAM169A ANKRD31
NDUFAF2 ANKRD31

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD31   26853
Cards
Entrez_Gene (NCBI)ANKRD31  256006  ankyrin repeat domain 31
Aliases
GeneCards (Weizmann)ANKRD31
Ensembl hg19 (Hinxton)ENSG00000145700 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000145700 [Gene_View]  chr5:75068297-75236878 [Contig_View]  ANKRD31 [Vega]
ICGC DataPortalENSG00000145700
TCGA cBioPortalANKRD31
AceView (NCBI)ANKRD31
Genatlas (Paris)ANKRD31
WikiGenes256006
SOURCE (Princeton)ANKRD31
Genetics Home Reference (NIH)ANKRD31
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD31  -     chr5:75068297-75236878 -  5q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD31  -     5q13.3   [Description]    (hg19-Feb_2009)
EnsemblANKRD31 - 5q13.3 [CytoView hg19]  ANKRD31 - 5q13.3 [CytoView hg38]
Mapping of homologs : NCBIANKRD31 [Mapview hg19]  ANKRD31 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097510
RefSeq transcript (Entrez)NM_001164443
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD31
Cluster EST : UnigeneHs.482533 [ NCBI ]
CGAP (NCI)Hs.482533
Alternative Splicing GalleryENSG00000145700
Gene ExpressionANKRD31 [ NCBI-GEO ]   ANKRD31 [ EBI - ARRAY_EXPRESS ]   ANKRD31 [ SEEK ]   ANKRD31 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD31 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)256006
GTEX Portal (Tissue expression)ANKRD31
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N7Z5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N7Z5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N7Z5
Splice isoforms : SwissVarQ8N7Z5
PhosPhoSitePlusQ8N7Z5
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom   
Domain families : Pfam (Sanger)Ank (PF00023)    Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam00023    pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKRD31
DMDM Disease mutations256006
Blocks (Seattle)ANKRD31
SuperfamilyQ8N7Z5
Human Protein AtlasENSG00000145700
Peptide AtlasQ8N7Z5
IPIIPI00740057   IPI00967139   
Protein Interaction databases
DIP (DOE-UCLA)Q8N7Z5
IntAct (EBI)Q8N7Z5
FunCoupENSG00000145700
BioGRIDANKRD31
STRING (EMBL)ANKRD31
ZODIACANKRD31
Ontologies - Pathways
QuickGOQ8N7Z5
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkANKRD31
Atlas of Cancer Signalling NetworkANKRD31
Wikipedia pathwaysANKRD31
Orthology - Evolution
OrthoDB256006
GeneTree (enSembl)ENSG00000145700
Phylogenetic Trees/Animal Genes : TreeFamANKRD31
HOVERGENQ8N7Z5
HOGENOMQ8N7Z5
Homologs : HomoloGeneANKRD31
Homology/Alignments : Family Browser (UCSC)ANKRD31
Gene fusions - Rearrangements
Fusion: TCGAFAM169A ANKRD31
Fusion: TCGANDUFAF2 ANKRD31
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD31 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD31
dbVarANKRD31
ClinVarANKRD31
1000_GenomesANKRD31 
Exome Variant ServerANKRD31
ExAC (Exome Aggregation Consortium)ANKRD31 (select the gene name)
Genetic variants : HAPMAP256006
Genomic Variants (DGV)ANKRD31 [DGVbeta]
DECIPHERANKRD31 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRD31 
Mutations
ICGC Data PortalANKRD31 
TCGA Data PortalANKRD31 
Broad Tumor PortalANKRD31
OASIS PortalANKRD31 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKRD31  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANKRD31
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANKRD31
DgiDB (Drug Gene Interaction Database)ANKRD31
DoCM (Curated mutations)ANKRD31 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD31 (select a term)
intoGenANKRD31
Cancer3DANKRD31(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenANKRD31
Genetic Testing Registry ANKRD31
NextProtQ8N7Z5 [Medical]
TSGene256006
GENETestsANKRD31
Target ValidationANKRD31
Huge Navigator ANKRD31 [HugePedia]
snp3D : Map Gene to Disease256006
BioCentury BCIQANKRD31
ClinGenANKRD31
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD256006
Chemical/Pharm GKB GenePA134879237
Clinical trialANKRD31
Miscellaneous
canSAR (ICR)ANKRD31 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD31
EVEXANKRD31
GoPubMedANKRD31
iHOPANKRD31
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:38:12 CEST 2017

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