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ANKRD31 (ankyrin repeat domain 31)

Identity

Alias (NCBI)-
HGNC (Hugo) ANKRD31
HGNC Alias symbFLJ40191
LocusID (NCBI) 256006
Atlas_Id 60336
Location 5q13.3  [Link to chromosome band 5q13]
Location_base_pair Starts at 75068297 and ends at 75236878 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FAM169A (5q13.3) / ANKRD31 (5q13.3)NDUFAF2 (5q12.1) / ANKRD31 (5q13.3)FAM169A ANKRD31
NDUFAF2 ANKRD31

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ANKRD31   26853
Cards
Entrez_Gene (NCBI)ANKRD31    ankyrin repeat domain 31
Aliases
GeneCards (Weizmann)ANKRD31
Ensembl hg19 (Hinxton)ENSG00000145700 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000145700 [Gene_View]  ENSG00000145700 [Sequence]  chr5:75068297-75236878 [Contig_View]  ANKRD31 [Vega]
ICGC DataPortalENSG00000145700
TCGA cBioPortalANKRD31
AceView (NCBI)ANKRD31
Genatlas (Paris)ANKRD31
SOURCE (Princeton)ANKRD31
Genetics Home Reference (NIH)ANKRD31
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD31  -     chr5:75068297-75236878 -  5q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD31  -     5q13.3   [Description]    (hg19-Feb_2009)
GoldenPathANKRD31 - 5q13.3 [CytoView hg19]  ANKRD31 - 5q13.3 [CytoView hg38]
ImmunoBaseENSG00000145700
Genome Data Viewer NCBIANKRD31 [Mapview hg19]  
OMIM618423   
Gene and transcription
Genbank (Entrez)AK097510
RefSeq transcript (Entrez)NM_001164443 NM_001372053
Consensus coding sequences : CCDS (NCBI)ANKRD31
Gene ExpressionANKRD31 [ NCBI-GEO ]   ANKRD31 [ EBI - ARRAY_EXPRESS ]   ANKRD31 [ SEEK ]   ANKRD31 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD31 [ Firebrowse - Broad ]
GenevisibleExpression of ANKRD31 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)256006
GTEX Portal (Tissue expression)ANKRD31
Human Protein AtlasENSG00000145700-ANKRD31 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N7Z5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N7Z5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N7Z5
PhosPhoSitePlusQ8N7Z5
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)ANKRD31    Ankyrin_rpt    Ankyrin_rpt-contain_dom    Ankyrin_rpt-contain_sf    RAMA   
Domain families : Pfam (Sanger)Ank (PF00023)    Ank_2 (PF12796)    RAMA (PF18755)   
Domain families : Pfam (NCBI)pfam00023    pfam12796    pfam18755   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKRD31
SuperfamilyQ8N7Z5
AlphaFold pdb e-kbQ8N7Z5   
Human Protein Atlas [tissue]ENSG00000145700-ANKRD31 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q8N7Z5
IntAct (EBI)Q8N7Z5
BioGRIDANKRD31
STRING (EMBL)ANKRD31
ZODIACANKRD31
Ontologies - Pathways
QuickGOQ8N7Z5
Ontology : AmiGOchromatin  nucleus  homologous chromosome pairing at meiosis  meiotic DNA double-strand break formation involved in reciprocal meiotic recombination  positive regulation of meiotic DNA double-strand break formation  
Ontology : EGO-EBIchromatin  nucleus  homologous chromosome pairing at meiosis  meiotic DNA double-strand break formation involved in reciprocal meiotic recombination  positive regulation of meiotic DNA double-strand break formation  
NDEx NetworkANKRD31
Atlas of Cancer Signalling NetworkANKRD31
Wikipedia pathwaysANKRD31
Orthology - Evolution
OrthoDB256006
GeneTree (enSembl)ENSG00000145700
Phylogenetic Trees/Animal Genes : TreeFamANKRD31
Homologs : HomoloGeneANKRD31
Homology/Alignments : Family Browser (UCSC)ANKRD31
Gene fusions - Rearrangements
Fusion : QuiverANKRD31
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD31 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD31
dbVarANKRD31
ClinVarANKRD31
MonarchANKRD31
1000_GenomesANKRD31 
Exome Variant ServerANKRD31
GNOMAD BrowserENSG00000145700
Varsome BrowserANKRD31
ACMGANKRD31 variants
VarityQ8N7Z5
Genomic Variants (DGV)ANKRD31 [DGVbeta]
DECIPHERANKRD31 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRD31 
Mutations
ICGC Data PortalANKRD31 
TCGA Data PortalANKRD31 
Broad Tumor PortalANKRD31
OASIS PortalANKRD31 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKRD31  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DANKRD31
Mutations and Diseases : HGMDANKRD31
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaANKRD31
DgiDB (Drug Gene Interaction Database)ANKRD31
DoCM (Curated mutations)ANKRD31
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD31
Cancer3DANKRD31
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM618423   
Orphanet
DisGeNETANKRD31
MedgenANKRD31
Genetic Testing Registry ANKRD31
NextProtQ8N7Z5 [Medical]
GENETestsANKRD31
Target ValidationANKRD31
Huge Navigator ANKRD31 [HugePedia]
ClinGenANKRD31
Clinical trials, drugs, therapy
MyCancerGenomeANKRD31
Protein Interactions : CTDANKRD31
Pharm GKB GenePA134879237
PharosQ8N7Z5
Clinical trialANKRD31
Miscellaneous
canSAR (ICR)ANKRD31
HarmonizomeANKRD31
DataMed IndexANKRD31
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXANKRD31
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:42:06 CEST 2021

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