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ANKRD32 (ankyrin repeat domain 32)

Identity

Other aliasBRCTD1
BRCTx
HGNC (Hugo) ANKRD32
LocusID (NCBI) 84250
Atlas_Id 60337
Location 5q15  [Link to chromosome band 5q15]
Location_base_pair Starts at 93954391 and ends at 94031573 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD32   25408
Cards
Entrez_Gene (NCBI)ANKRD32  84250  ankyrin repeat domain 32
AliasesBRCTD1; BRCTx
GeneCards (Weizmann)ANKRD32
Ensembl hg19 (Hinxton)ENSG00000133302 [Gene_View]  chr5:93954391-94031573 [Contig_View]  ANKRD32 [Vega]
Ensembl hg38 (Hinxton)ENSG00000133302 [Gene_View]  chr5:93954391-94031573 [Contig_View]  ANKRD32 [Vega]
ICGC DataPortalENSG00000133302
TCGA cBioPortalANKRD32
AceView (NCBI)ANKRD32
Genatlas (Paris)ANKRD32
WikiGenes84250
SOURCE (Princeton)ANKRD32
Genetics Home Reference (NIH)ANKRD32
Genomic and cartography
GoldenPath hg19 (UCSC)ANKRD32  -     chr5:93954391-94031573 +  5q15   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ANKRD32  -     5q15   [Description]    (hg38-Dec_2013)
EnsemblANKRD32 - 5q15 [CytoView hg19]  ANKRD32 - 5q15 [CytoView hg38]
Mapping of homologs : NCBIANKRD32 [Mapview hg19]  ANKRD32 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK297452 AK299080 AK309859 AL050298 AL136560
RefSeq transcript (Entrez)NM_032290
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929323
Consensus coding sequences : CCDS (NCBI)ANKRD32
Cluster EST : UnigeneHs.657315 [ NCBI ]
CGAP (NCI)Hs.657315
Alternative Splicing GalleryENSG00000133302
Gene ExpressionANKRD32 [ NCBI-GEO ]   ANKRD32 [ EBI - ARRAY_EXPRESS ]   ANKRD32 [ SEEK ]   ANKRD32 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD32 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84250
GTEX Portal (Tissue expression)ANKRD32
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BQI6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BQI6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BQI6
Splice isoforms : SwissVarQ9BQI6
PhosPhoSitePlusQ9BQI6
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    BRCT_dom   
Domain families : Pfam (Sanger)Ank (PF00023)    Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam00023    pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  BRCT (SM00292)  
Conserved Domain (NCBI)ANKRD32
DMDM Disease mutations84250
Blocks (Seattle)ANKRD32
SuperfamilyQ9BQI6
Human Protein AtlasENSG00000133302
Peptide AtlasQ9BQI6
HPRD08538
IPIIPI00419518   IPI00908334   IPI00967130   IPI00977527   
Protein Interaction databases
DIP (DOE-UCLA)Q9BQI6
IntAct (EBI)Q9BQI6
FunCoupENSG00000133302
BioGRIDANKRD32
STRING (EMBL)ANKRD32
ZODIACANKRD32
Ontologies - Pathways
QuickGOQ9BQI6
Ontology : AmiGOnucleus  centrosome  
Ontology : EGO-EBInucleus  centrosome  
NDEx NetworkANKRD32
Atlas of Cancer Signalling NetworkANKRD32
Wikipedia pathwaysANKRD32
Orthology - Evolution
OrthoDB84250
GeneTree (enSembl)ENSG00000133302
Phylogenetic Trees/Animal Genes : TreeFamANKRD32
HOVERGENQ9BQI6
HOGENOMQ9BQI6
Homologs : HomoloGeneANKRD32
Homology/Alignments : Family Browser (UCSC)ANKRD32
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD32 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD32
dbVarANKRD32
ClinVarANKRD32
1000_GenomesANKRD32 
Exome Variant ServerANKRD32
ExAC (Exome Aggregation Consortium)ANKRD32 (select the gene name)
Genetic variants : HAPMAP84250
Genomic Variants (DGV)ANKRD32 [DGVbeta]
DECIPHER (Syndromes)5:93954391-94031573  ENSG00000133302
CONAN: Copy Number AnalysisANKRD32 
Mutations
ICGC Data PortalANKRD32 
TCGA Data PortalANKRD32 
Broad Tumor PortalANKRD32
OASIS PortalANKRD32 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKRD32  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANKRD32
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANKRD32
DgiDB (Drug Gene Interaction Database)ANKRD32
DoCM (Curated mutations)ANKRD32 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD32 (select a term)
intoGenANKRD32
Cancer3DANKRD32(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenANKRD32
Genetic Testing Registry ANKRD32
NextProtQ9BQI6 [Medical]
TSGene84250
GENETestsANKRD32
Huge Navigator ANKRD32 [HugePedia]
snp3D : Map Gene to Disease84250
BioCentury BCIQANKRD32
ClinGenANKRD32
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84250
Chemical/Pharm GKB GenePA134911523
Clinical trialANKRD32
Miscellaneous
canSAR (ICR)ANKRD32 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD32
EVEXANKRD32
GoPubMedANKRD32
iHOPANKRD32
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 11:54:24 CET 2017

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