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ANKRD35 (ankyrin repeat domain 35)

Identity

Alias_symbol (synonym)FLJ25124
Other alias-
HGNC (Hugo) ANKRD35
LocusID (NCBI) 148741
Atlas_Id 60343
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 145866560 and ends at 145885866 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD35   26323
Cards
Entrez_Gene (NCBI)ANKRD35  148741  ankyrin repeat domain 35
Aliases
GeneCards (Weizmann)ANKRD35
Ensembl hg19 (Hinxton)ENSG00000198483 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198483 [Gene_View]  chr1:145866560-145885866 [Contig_View]  ANKRD35 [Vega]
ICGC DataPortalENSG00000198483
TCGA cBioPortalANKRD35
AceView (NCBI)ANKRD35
Genatlas (Paris)ANKRD35
WikiGenes148741
SOURCE (Princeton)ANKRD35
Genetics Home Reference (NIH)ANKRD35
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD35  -     chr1:145866560-145885866 -  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD35  -     1q21.1   [Description]    (hg19-Feb_2009)
EnsemblANKRD35 - 1q21.1 [CytoView hg19]  ANKRD35 - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBIANKRD35 [Mapview hg19]  ANKRD35 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057853 AK091120 AK294308 AK296861 AW245831
RefSeq transcript (Entrez)NM_001280799 NM_144698
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD35
Cluster EST : UnigeneHs.710624 [ NCBI ]
CGAP (NCI)Hs.710624
Alternative Splicing GalleryENSG00000198483
Gene ExpressionANKRD35 [ NCBI-GEO ]   ANKRD35 [ EBI - ARRAY_EXPRESS ]   ANKRD35 [ SEEK ]   ANKRD35 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD35 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)148741
GTEX Portal (Tissue expression)ANKRD35
Human Protein AtlasENSG00000198483-ANKRD35 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N283   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N283  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N283
Splice isoforms : SwissVarQ8N283
PhosPhoSitePlusQ8N283
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom   
Domain families : Pfam (Sanger)Ank (PF00023)    Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam00023    pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKRD35
DMDM Disease mutations148741
Blocks (Seattle)ANKRD35
SuperfamilyQ8N283
Human Protein Atlas [tissue]ENSG00000198483-ANKRD35 [tissue]
Peptide AtlasQ8N283
HPRD08050
IPIIPI00166331   IPI00910939   IPI01014489   
Protein Interaction databases
DIP (DOE-UCLA)Q8N283
IntAct (EBI)Q8N283
FunCoupENSG00000198483
BioGRIDANKRD35
STRING (EMBL)ANKRD35
ZODIACANKRD35
Ontologies - Pathways
QuickGOQ8N283
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkANKRD35
Atlas of Cancer Signalling NetworkANKRD35
Wikipedia pathwaysANKRD35
Orthology - Evolution
OrthoDB148741
GeneTree (enSembl)ENSG00000198483
Phylogenetic Trees/Animal Genes : TreeFamANKRD35
HOVERGENQ8N283
HOGENOMQ8N283
Homologs : HomoloGeneANKRD35
Homology/Alignments : Family Browser (UCSC)ANKRD35
Gene fusions - Rearrangements
Tumor Fusion PortalANKRD35
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD35 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD35
dbVarANKRD35
ClinVarANKRD35
1000_GenomesANKRD35 
Exome Variant ServerANKRD35
ExAC (Exome Aggregation Consortium)ENSG00000198483
GNOMAD BrowserENSG00000198483
Genetic variants : HAPMAP148741
Genomic Variants (DGV)ANKRD35 [DGVbeta]
DECIPHERANKRD35 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRD35 
Mutations
ICGC Data PortalANKRD35 
TCGA Data PortalANKRD35 
Broad Tumor PortalANKRD35
OASIS PortalANKRD35 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKRD35  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANKRD35
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANKRD35
DgiDB (Drug Gene Interaction Database)ANKRD35
DoCM (Curated mutations)ANKRD35 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD35 (select a term)
intoGenANKRD35
Cancer3DANKRD35(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETANKRD35
MedgenANKRD35
Genetic Testing Registry ANKRD35
NextProtQ8N283 [Medical]
TSGene148741
GENETestsANKRD35
Target ValidationANKRD35
Huge Navigator ANKRD35 [HugePedia]
snp3D : Map Gene to Disease148741
BioCentury BCIQANKRD35
ClinGenANKRD35
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD148741
Chemical/Pharm GKB GenePA134896362
Clinical trialANKRD35
Miscellaneous
canSAR (ICR)ANKRD35 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD35
EVEXANKRD35
GoPubMedANKRD35
iHOPANKRD35
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 12:59:13 CET 2017

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