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ANKRD36 (ankyrin repeat domain 36)

Identity

Alias_symbol (synonym)UNQ2430
Other alias
HGNC (Hugo) ANKRD36
LocusID (NCBI) 375248
Atlas_Id 60344
Location 2q11.2  [Link to chromosome band 2q11]
Location_base_pair Starts at 97113496 and ends at 97264520 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ANKRD36 (2q11.2) / FAM178B (2q11.2)CAMSAP2 (1q32.1) / ANKRD36 (2q11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD36   24079
Cards
Entrez_Gene (NCBI)ANKRD36  375248  ankyrin repeat domain 36
AliasesUNQ2430
GeneCards (Weizmann)ANKRD36
Ensembl hg19 (Hinxton)ENSG00000135976 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135976 [Gene_View]  chr2:97113496-97264520 [Contig_View]  ANKRD36 [Vega]
ICGC DataPortalENSG00000135976
TCGA cBioPortalANKRD36
AceView (NCBI)ANKRD36
Genatlas (Paris)ANKRD36
WikiGenes375248
SOURCE (Princeton)ANKRD36
Genetics Home Reference (NIH)ANKRD36
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD36  -     chr2:97113496-97264520 +  2q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD36  -     2q11.2   [Description]    (hg19-Feb_2009)
EnsemblANKRD36 - 2q11.2 [CytoView hg19]  ANKRD36 - 2q11.2 [CytoView hg38]
Mapping of homologs : NCBIANKRD36 [Mapview hg19]  ANKRD36 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB046861 AF543495 AK090926 AK304740 AK307629
RefSeq transcript (Entrez)NM_001164315 NM_198555
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD36
Cluster EST : UnigeneHs.541894 [ NCBI ]
CGAP (NCI)Hs.541894
Alternative Splicing GalleryENSG00000135976
Gene ExpressionANKRD36 [ NCBI-GEO ]   ANKRD36 [ EBI - ARRAY_EXPRESS ]   ANKRD36 [ SEEK ]   ANKRD36 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD36 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)375248
GTEX Portal (Tissue expression)ANKRD36
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6QL64   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6QL64  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6QL64
Splice isoforms : SwissVarA6QL64
PhosPhoSitePlusA6QL64
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom   
Domain families : Pfam (Sanger)Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKRD36
DMDM Disease mutations375248
Blocks (Seattle)ANKRD36
SuperfamilyA6QL64
Human Protein AtlasENSG00000135976
Peptide AtlasA6QL64
HPRD16492
IPIIPI00943735   IPI00893786   IPI00973543   IPI00942188   IPI00829852   IPI01015203   IPI00152532   
Protein Interaction databases
DIP (DOE-UCLA)A6QL64
IntAct (EBI)A6QL64
FunCoupENSG00000135976
BioGRIDANKRD36
STRING (EMBL)ANKRD36
ZODIACANKRD36
Ontologies - Pathways
QuickGOA6QL64
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkANKRD36
Atlas of Cancer Signalling NetworkANKRD36
Wikipedia pathwaysANKRD36
Orthology - Evolution
OrthoDB375248
GeneTree (enSembl)ENSG00000135976
Phylogenetic Trees/Animal Genes : TreeFamANKRD36
HOVERGENA6QL64
HOGENOMA6QL64
Homologs : HomoloGeneANKRD36
Homology/Alignments : Family Browser (UCSC)ANKRD36
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD36 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD36
dbVarANKRD36
ClinVarANKRD36
1000_GenomesANKRD36 
Exome Variant ServerANKRD36
ExAC (Exome Aggregation Consortium)ANKRD36 (select the gene name)
Genetic variants : HAPMAP375248
Genomic Variants (DGV)ANKRD36 [DGVbeta]
DECIPHERANKRD36 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRD36 
Mutations
ICGC Data PortalANKRD36 
TCGA Data PortalANKRD36 
Broad Tumor PortalANKRD36
OASIS PortalANKRD36 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKRD36  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANKRD36
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANKRD36
DgiDB (Drug Gene Interaction Database)ANKRD36
DoCM (Curated mutations)ANKRD36 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD36 (select a term)
intoGenANKRD36
Cancer3DANKRD36(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenANKRD36
Genetic Testing Registry ANKRD36
NextProtA6QL64 [Medical]
TSGene375248
GENETestsANKRD36
Target ValidationANKRD36
Huge Navigator ANKRD36 [HugePedia]
snp3D : Map Gene to Disease375248
BioCentury BCIQANKRD36
ClinGenANKRD36
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD375248
Chemical/Pharm GKB GenePA134930297
Clinical trialANKRD36
Miscellaneous
canSAR (ICR)ANKRD36 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD36
EVEXANKRD36
GoPubMedANKRD36
iHOPANKRD36
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:38:14 CEST 2017

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