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ANKRD36BP1 (ankyrin repeat domain 36B pseudogene 1)

Identity

Alias_namesANKRD26L1
ANKRD36BL1
ankyrin repeat domain 26-like 1
ankyrin repeat domain 36B-like 1
Alias_symbol (synonym)MGC12538
Other alias
HGNC (Hugo) ANKRD36BP1
LocusID (NCBI) 84832
Atlas_Id 60345
Location 1q24.2  [Link to chromosome band 1q24]
Location_base_pair Starts at 168245581 and ends at 168247430 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD36BP1   28169
Cards
Entrez_Gene (NCBI)ANKRD36BP1  84832  ankyrin repeat domain 36B pseudogene 1
AliasesANKRD26L1; ANKRD36BL1
GeneCards (Weizmann)ANKRD36BP1
Ensembl hg19 (Hinxton)ENSG00000214262 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214262 [Gene_View]  chr1:168245581-168247430 [Contig_View]  ANKRD36BP1 [Vega]
ICGC DataPortalENSG00000214262
TCGA cBioPortalANKRD36BP1
AceView (NCBI)ANKRD36BP1
Genatlas (Paris)ANKRD36BP1
WikiGenes84832
SOURCE (Princeton)ANKRD36BP1
Genetics Home Reference (NIH)ANKRD36BP1
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD36BP1  -     chr1:168245581-168247430 -  1q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD36BP1  -     1q24.2   [Description]    (hg19-Feb_2009)
EnsemblANKRD36BP1 - 1q24.2 [CytoView hg19]  ANKRD36BP1 - 1q24.2 [CytoView hg38]
Mapping of homologs : NCBIANKRD36BP1 [Mapview hg19]  ANKRD36BP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC007072 DA219755 DA246884 DB229590
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD36BP1
Cluster EST : UnigeneHs.537067 [ NCBI ]
CGAP (NCI)Hs.537067
Alternative Splicing GalleryENSG00000214262
Gene ExpressionANKRD36BP1 [ NCBI-GEO ]   ANKRD36BP1 [ EBI - ARRAY_EXPRESS ]   ANKRD36BP1 [ SEEK ]   ANKRD36BP1 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD36BP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84832
GTEX Portal (Tissue expression)ANKRD36BP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96IX9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96IX9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96IX9
Splice isoforms : SwissVarQ96IX9
PhosPhoSitePlusQ96IX9
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ANKRD36BP1
DMDM Disease mutations84832
Blocks (Seattle)ANKRD36BP1
SuperfamilyQ96IX9
Human Protein AtlasENSG00000214262
Peptide AtlasQ96IX9
IPIIPI00063907   
Protein Interaction databases
DIP (DOE-UCLA)Q96IX9
IntAct (EBI)Q96IX9
FunCoupENSG00000214262
BioGRIDANKRD36BP1
STRING (EMBL)ANKRD36BP1
ZODIACANKRD36BP1
Ontologies - Pathways
QuickGOQ96IX9
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkANKRD36BP1
Atlas of Cancer Signalling NetworkANKRD36BP1
Wikipedia pathwaysANKRD36BP1
Orthology - Evolution
OrthoDB84832
GeneTree (enSembl)ENSG00000214262
Phylogenetic Trees/Animal Genes : TreeFamANKRD36BP1
HOVERGENQ96IX9
HOGENOMQ96IX9
Homologs : HomoloGeneANKRD36BP1
Homology/Alignments : Family Browser (UCSC)ANKRD36BP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD36BP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD36BP1
dbVarANKRD36BP1
ClinVarANKRD36BP1
1000_GenomesANKRD36BP1 
Exome Variant ServerANKRD36BP1
ExAC (Exome Aggregation Consortium)ANKRD36BP1 (select the gene name)
Genetic variants : HAPMAP84832
Genomic Variants (DGV)ANKRD36BP1 [DGVbeta]
DECIPHERANKRD36BP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRD36BP1 
Mutations
ICGC Data PortalANKRD36BP1 
TCGA Data PortalANKRD36BP1 
Broad Tumor PortalANKRD36BP1
OASIS PortalANKRD36BP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKRD36BP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANKRD36BP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANKRD36BP1
DgiDB (Drug Gene Interaction Database)ANKRD36BP1
DoCM (Curated mutations)ANKRD36BP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD36BP1 (select a term)
intoGenANKRD36BP1
Cancer3DANKRD36BP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenANKRD36BP1
Genetic Testing Registry ANKRD36BP1
NextProtQ96IX9 [Medical]
TSGene84832
GENETestsANKRD36BP1
Huge Navigator ANKRD36BP1 [HugePedia]
snp3D : Map Gene to Disease84832
BioCentury BCIQANKRD36BP1
ClinGenANKRD36BP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84832
Chemical/Pharm GKB GenePA142672603
Clinical trialANKRD36BP1
Miscellaneous
canSAR (ICR)ANKRD36BP1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD36BP1
EVEXANKRD36BP1
GoPubMedANKRD36BP1
iHOPANKRD36BP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:00:12 CEST 2017

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