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ANKRD36C (ankyrin repeat domain 36C)

Identity

Alias_symbol (synonym)DKFZp667P0924
Other alias-
HGNC (Hugo) ANKRD36C
LocusID (NCBI) 400986
Atlas_Id 60347
Location 2q11.1  [Link to chromosome band 2q11]
Location_base_pair Starts at 96521756 and ends at 96573247 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ANKRD36C   32946
Cards
Entrez_Gene (NCBI)ANKRD36C  400986  ankyrin repeat domain 36C
Aliases
GeneCards (Weizmann)ANKRD36C
Ensembl hg19 (Hinxton) [Gene_View]  chr2:96521756-96573247 [Contig_View]  ANKRD36C [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:96521756-96573247 [Contig_View]  ANKRD36C [Vega]
TCGA cBioPortalANKRD36C
AceView (NCBI)ANKRD36C
Genatlas (Paris)ANKRD36C
WikiGenes400986
SOURCE (Princeton)ANKRD36C
Genetics Home Reference (NIH)ANKRD36C
Genomic and cartography
GoldenPath hg19 (UCSC)ANKRD36C  -     chr2:96521756-96573247 -  2q11.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ANKRD36C  -     2q11.1   [Description]    (hg38-Dec_2013)
EnsemblANKRD36C - 2q11.1 [CytoView hg19]  ANKRD36C - 2q11.1 [CytoView hg38]
Mapping of homologs : NCBIANKRD36C [Mapview hg19]  ANKRD36C [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123626 AK124101 AK302433 AL832836 AL832977
RefSeq transcript (Entrez)NM_001010914
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929303
Consensus coding sequences : CCDS (NCBI)ANKRD36C
Cluster EST : UnigeneHs.646318 [ NCBI ]
CGAP (NCI)Hs.646318
Gene ExpressionANKRD36C [ NCBI-GEO ]   ANKRD36C [ EBI - ARRAY_EXPRESS ]   ANKRD36C [ SEEK ]   ANKRD36C [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD36C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)400986
GTEX Portal (Tissue expression)ANKRD36C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5JPF3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5JPF3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5JPF3
Splice isoforms : SwissVarQ5JPF3
PhosPhoSitePlusQ5JPF3
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom   
Domain families : Pfam (Sanger)Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKRD36C
DMDM Disease mutations400986
Blocks (Seattle)ANKRD36C
SuperfamilyQ5JPF3
Peptide AtlasQ5JPF3
HPRD17388
IPIIPI00889046   IPI00887308   IPI00940342   IPI00930240   IPI00978560   IPI00980452   IPI00979793   
Protein Interaction databases
DIP (DOE-UCLA)Q5JPF3
IntAct (EBI)Q5JPF3
BioGRIDANKRD36C
STRING (EMBL)ANKRD36C
ZODIACANKRD36C
Ontologies - Pathways
QuickGOQ5JPF3
Ontology : AmiGOion channel inhibitor activity  
Ontology : EGO-EBIion channel inhibitor activity  
NDEx NetworkANKRD36C
Atlas of Cancer Signalling NetworkANKRD36C
Wikipedia pathwaysANKRD36C
Orthology - Evolution
OrthoDB400986
Phylogenetic Trees/Animal Genes : TreeFamANKRD36C
HOVERGENQ5JPF3
HOGENOMQ5JPF3
Homologs : HomoloGeneANKRD36C
Homology/Alignments : Family Browser (UCSC)ANKRD36C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD36C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD36C
dbVarANKRD36C
ClinVarANKRD36C
1000_GenomesANKRD36C 
Exome Variant ServerANKRD36C
ExAC (Exome Aggregation Consortium)ANKRD36C (select the gene name)
Genetic variants : HAPMAP400986
Genomic Variants (DGV)ANKRD36C [DGVbeta]
DECIPHER (Syndromes)2:96521756-96573247  
CONAN: Copy Number AnalysisANKRD36C 
Mutations
ICGC Data PortalANKRD36C 
TCGA Data PortalANKRD36C 
Broad Tumor PortalANKRD36C
OASIS PortalANKRD36C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKRD36C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANKRD36C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANKRD36C
DgiDB (Drug Gene Interaction Database)ANKRD36C
DoCM (Curated mutations)ANKRD36C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD36C (select a term)
intoGenANKRD36C
Cancer3DANKRD36C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenANKRD36C
Genetic Testing Registry ANKRD36C
NextProtQ5JPF3 [Medical]
TSGene400986
GENETestsANKRD36C
Huge Navigator ANKRD36C [HugePedia]
snp3D : Map Gene to Disease400986
BioCentury BCIQANKRD36C
ClinGenANKRD36C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400986
Clinical trialANKRD36C
Miscellaneous
canSAR (ICR)ANKRD36C (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD36C
EVEXANKRD36C
GoPubMedANKRD36C
iHOPANKRD36C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:54:26 CET 2017

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