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ANKRD37 (ankyrin repeat domain 37)

Identity

Alias_symbol (synonym)Lrp2bp
Other alias
HGNC (Hugo) ANKRD37
LocusID (NCBI) 353322
Atlas_Id 60348
Location 4q35.1  [Link to chromosome band 4q35]
Location_base_pair Starts at 185396686 and ends at 185400245 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ANKRD37 (4q35.1) / ANKRD37 (4q35.1)ANKRD37 (4q35.1) / MRPL49 (11q13.1)ANKRD37 (4q35.1) / MTERF4 (2q37.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD37   29593
Cards
Entrez_Gene (NCBI)ANKRD37  353322  ankyrin repeat domain 37
AliasesLrp2bp
GeneCards (Weizmann)ANKRD37
Ensembl hg19 (Hinxton)ENSG00000186352 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186352 [Gene_View]  chr4:185396686-185400245 [Contig_View]  ANKRD37 [Vega]
ICGC DataPortalENSG00000186352
TCGA cBioPortalANKRD37
AceView (NCBI)ANKRD37
Genatlas (Paris)ANKRD37
WikiGenes353322
SOURCE (Princeton)ANKRD37
Genetics Home Reference (NIH)ANKRD37
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD37  -     chr4:185396686-185400245 +  4q35.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD37  -     4q35.1   [Description]    (hg19-Feb_2009)
EnsemblANKRD37 - 4q35.1 [CytoView hg19]  ANKRD37 - 4q35.1 [CytoView hg38]
Mapping of homologs : NCBIANKRD37 [Mapview hg19]  ANKRD37 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI375295 AK127395 AK303243 AY296056 BC088376
RefSeq transcript (Entrez)NM_181726
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD37
Cluster EST : UnigeneHs.508154 [ NCBI ]
CGAP (NCI)Hs.508154
Alternative Splicing GalleryENSG00000186352
Gene ExpressionANKRD37 [ NCBI-GEO ]   ANKRD37 [ EBI - ARRAY_EXPRESS ]   ANKRD37 [ SEEK ]   ANKRD37 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD37 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)353322
GTEX Portal (Tissue expression)ANKRD37
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z713   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z713  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z713
Splice isoforms : SwissVarQ7Z713
PhosPhoSitePlusQ7Z713
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom   
Domain families : Pfam (Sanger)Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKRD37
DMDM Disease mutations353322
Blocks (Seattle)ANKRD37
SuperfamilyQ7Z713
Human Protein AtlasENSG00000186352
Peptide AtlasQ7Z713
HPRD17461
IPIIPI00376353   IPI00968245   IPI00967967   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z713
IntAct (EBI)Q7Z713
FunCoupENSG00000186352
BioGRIDANKRD37
STRING (EMBL)ANKRD37
ZODIACANKRD37
Ontologies - Pathways
QuickGOQ7Z713
Ontology : AmiGOnucleus  mitochondrion  cytosol  
Ontology : EGO-EBInucleus  mitochondrion  cytosol  
NDEx NetworkANKRD37
Atlas of Cancer Signalling NetworkANKRD37
Wikipedia pathwaysANKRD37
Orthology - Evolution
OrthoDB353322
GeneTree (enSembl)ENSG00000186352
Phylogenetic Trees/Animal Genes : TreeFamANKRD37
HOVERGENQ7Z713
HOGENOMQ7Z713
Homologs : HomoloGeneANKRD37
Homology/Alignments : Family Browser (UCSC)ANKRD37
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD37 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD37
dbVarANKRD37
ClinVarANKRD37
1000_GenomesANKRD37 
Exome Variant ServerANKRD37
ExAC (Exome Aggregation Consortium)ANKRD37 (select the gene name)
Genetic variants : HAPMAP353322
Genomic Variants (DGV)ANKRD37 [DGVbeta]
DECIPHERANKRD37 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRD37 
Mutations
ICGC Data PortalANKRD37 
TCGA Data PortalANKRD37 
Broad Tumor PortalANKRD37
OASIS PortalANKRD37 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANKRD37  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANKRD37
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANKRD37
DgiDB (Drug Gene Interaction Database)ANKRD37
DoCM (Curated mutations)ANKRD37 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD37 (select a term)
intoGenANKRD37
Cancer3DANKRD37(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenANKRD37
Genetic Testing Registry ANKRD37
NextProtQ7Z713 [Medical]
TSGene353322
GENETestsANKRD37
Huge Navigator ANKRD37 [HugePedia]
snp3D : Map Gene to Disease353322
BioCentury BCIQANKRD37
ClinGenANKRD37
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD353322
Chemical/Pharm GKB GenePA142672604
Clinical trialANKRD37
Miscellaneous
canSAR (ICR)ANKRD37 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD37
EVEXANKRD37
GoPubMedANKRD37
iHOPANKRD37
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:00:12 CEST 2017

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