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ANKRD61 (ankyrin repeat domain 61)

Identity

Other alias-
HGNC (Hugo) ANKRD61
LocusID (NCBI) 100310846
Atlas_Id 60362
Location 7p22.1  [Link to chromosome band 7p22]
Location_base_pair Starts at 6031376 and ends at 6036552 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD61   22467
Cards
Entrez_Gene (NCBI)ANKRD61  100310846  ankyrin repeat domain 61
Aliases
GeneCards (Weizmann)ANKRD61
Ensembl hg19 (Hinxton)ENSG00000157999 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000157999 [Gene_View]  chr7:6031376-6036552 [Contig_View]  ANKRD61 [Vega]
ICGC DataPortalENSG00000157999
TCGA cBioPortalANKRD61
AceView (NCBI)ANKRD61
Genatlas (Paris)ANKRD61
WikiGenes100310846
SOURCE (Princeton)ANKRD61
Genetics Home Reference (NIH)ANKRD61
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD61  -     chr7:6031376-6036552 +  7p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD61  -     7p22.1   [Description]    (hg19-Feb_2009)
EnsemblANKRD61 - 7p22.1 [CytoView hg19]  ANKRD61 - 7p22.1 [CytoView hg38]
Mapping of homologs : NCBIANKRD61 [Mapview hg19]  ANKRD61 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI221268
RefSeq transcript (Entrez)NM_001271700
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD61
Cluster EST : UnigeneHs.744468 [ NCBI ]
CGAP (NCI)Hs.744468
Alternative Splicing GalleryENSG00000157999
Gene ExpressionANKRD61 [ NCBI-GEO ]   ANKRD61 [ EBI - ARRAY_EXPRESS ]   ANKRD61 [ SEEK ]   ANKRD61 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD61 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100310846
GTEX Portal (Tissue expression)ANKRD61
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NGH8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NGH8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NGH8
Splice isoforms : SwissVarA6NGH8
PhosPhoSitePlusA6NGH8
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom   
Domain families : Pfam (Sanger)Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKRD61
DMDM Disease mutations100310846
Blocks (Seattle)ANKRD61
SuperfamilyA6NGH8
Human Protein AtlasENSG00000157999
Peptide AtlasA6NGH8
IPIIPI00062735   
Protein Interaction databases
DIP (DOE-UCLA)A6NGH8
IntAct (EBI)A6NGH8
FunCoupENSG00000157999
BioGRIDANKRD61
STRING (EMBL)ANKRD61
ZODIACANKRD61
Ontologies - Pathways
QuickGOA6NGH8
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkANKRD61
Atlas of Cancer Signalling NetworkANKRD61
Wikipedia pathwaysANKRD61
Orthology - Evolution
OrthoDB100310846
GeneTree (enSembl)ENSG00000157999
Phylogenetic Trees/Animal Genes : TreeFamANKRD61
HOVERGENA6NGH8
HOGENOMA6NGH8
Homologs : HomoloGeneANKRD61
Homology/Alignments : Family Browser (UCSC)ANKRD61
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD61 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD61
dbVarANKRD61
ClinVarANKRD61
1000_GenomesANKRD61 
Exome Variant ServerANKRD61
ExAC (Exome Aggregation Consortium)ANKRD61 (select the gene name)
Genetic variants : HAPMAP100310846
Genomic Variants (DGV)ANKRD61 [DGVbeta]
DECIPHERANKRD61 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRD61 
Mutations
ICGC Data PortalANKRD61 
TCGA Data PortalANKRD61 
Broad Tumor PortalANKRD61
OASIS PortalANKRD61 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDANKRD61
BioMutasearch ANKRD61
DgiDB (Drug Gene Interaction Database)ANKRD61
DoCM (Curated mutations)ANKRD61 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD61 (select a term)
intoGenANKRD61
Cancer3DANKRD61(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenANKRD61
Genetic Testing Registry ANKRD61
NextProtA6NGH8 [Medical]
TSGene100310846
GENETestsANKRD61
Target ValidationANKRD61
Huge Navigator ANKRD61 [HugePedia]
snp3D : Map Gene to Disease100310846
BioCentury BCIQANKRD61
ClinGenANKRD61
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100310846
Chemical/Pharm GKB GenePA164715346
Clinical trialANKRD61
Miscellaneous
canSAR (ICR)ANKRD61 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD61
EVEXANKRD61
GoPubMedANKRD61
iHOPANKRD61
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:38:18 CEST 2017

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