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ANKRD66 (ankyrin repeat domain 66)

Identity

Other alias-
HGNC (Hugo) ANKRD66
LocusID (NCBI) 100287718
Atlas_Id 60367
Location 6p12.3  [Link to chromosome band 6p12]
Location_base_pair Starts at 46746917 and ends at 46759217 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANKRD66   44669
Cards
Entrez_Gene (NCBI)ANKRD66  100287718  ankyrin repeat domain 66
Aliases
GeneCards (Weizmann)ANKRD66
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr6:46746917-46759217 [Contig_View]  ANKRD66 [Vega]
TCGA cBioPortalANKRD66
AceView (NCBI)ANKRD66
Genatlas (Paris)ANKRD66
WikiGenes100287718
SOURCE (Princeton)ANKRD66
Genetics Home Reference (NIH)ANKRD66
Genomic and cartography
GoldenPath hg38 (UCSC)ANKRD66  -     chr6:46746917-46759217 +  6p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANKRD66  -     6p12.3   [Description]    (hg19-Feb_2009)
EnsemblANKRD66 - 6p12.3 [CytoView hg19]  ANKRD66 - 6p12.3 [CytoView hg38]
Mapping of homologs : NCBIANKRD66 [Mapview hg19]  ANKRD66 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057637 AK304342 BU608132 DC417416
RefSeq transcript (Entrez)NM_001162435
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANKRD66
Cluster EST : UnigeneHs.736491 [ NCBI ]
CGAP (NCI)Hs.736491
Gene ExpressionANKRD66 [ NCBI-GEO ]   ANKRD66 [ EBI - ARRAY_EXPRESS ]   ANKRD66 [ SEEK ]   ANKRD66 [ MEM ]
Gene Expression Viewer (FireBrowse)ANKRD66 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100287718
GTEX Portal (Tissue expression)ANKRD66
Protein : pattern, domain, 3D structure
UniProt/SwissProtB4E2M5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB4E2M5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB4E2M5
Splice isoforms : SwissVarB4E2M5
PhosPhoSitePlusB4E2M5
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom   
Domain families : Pfam (Sanger)Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)ANKRD66
DMDM Disease mutations100287718
Blocks (Seattle)ANKRD66
SuperfamilyB4E2M5
Peptide AtlasB4E2M5
IPIIPI00747132   
Protein Interaction databases
DIP (DOE-UCLA)B4E2M5
IntAct (EBI)B4E2M5
BioGRIDANKRD66
STRING (EMBL)ANKRD66
ZODIACANKRD66
Ontologies - Pathways
QuickGOB4E2M5
Ontology : AmiGOintracellular  
Ontology : EGO-EBIintracellular  
NDEx NetworkANKRD66
Atlas of Cancer Signalling NetworkANKRD66
Wikipedia pathwaysANKRD66
Orthology - Evolution
OrthoDB100287718
Phylogenetic Trees/Animal Genes : TreeFamANKRD66
HOVERGENB4E2M5
HOGENOMB4E2M5
Homologs : HomoloGeneANKRD66
Homology/Alignments : Family Browser (UCSC)ANKRD66
Gene fusions - Rearrangements
Fusion : QuiverANKRD66
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANKRD66 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANKRD66
dbVarANKRD66
ClinVarANKRD66
1000_GenomesANKRD66 
Exome Variant ServerANKRD66
Genetic variants : HAPMAP100287718
Genomic Variants (DGV)ANKRD66 [DGVbeta]
DECIPHERANKRD66 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANKRD66 
Mutations
ICGC Data PortalANKRD66 
TCGA Data PortalANKRD66 
Broad Tumor PortalANKRD66
OASIS PortalANKRD66 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDANKRD66
BioMutasearch ANKRD66
DgiDB (Drug Gene Interaction Database)ANKRD66
DoCM (Curated mutations)ANKRD66 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANKRD66 (select a term)
intoGenANKRD66
Cancer3DANKRD66(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETANKRD66
MedgenANKRD66
Genetic Testing Registry ANKRD66
NextProtB4E2M5 [Medical]
TSGene100287718
GENETestsANKRD66
Target ValidationANKRD66
Huge Navigator ANKRD66 [HugePedia]
snp3D : Map Gene to Disease100287718
BioCentury BCIQANKRD66
ClinGenANKRD66
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287718
Chemical/Pharm GKB GenePA166049153
Clinical trialANKRD66
Miscellaneous
canSAR (ICR)ANKRD66 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANKRD66
EVEXANKRD66
GoPubMedANKRD66
iHOPANKRD66
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Feb 23 18:10:57 CET 2018

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