Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ANO1-AS2 (ANO1 antisense RNA 2 (head to head))

Identity

Alias_namesC11orf78
NCRNA00224
chromosome 11 open reading frame 78
non-protein coding RNA 224
ANO1 antisense RNA 2 (non-protein coding)
ANO1 antisense RNA 2
Other alias
HGNC (Hugo) ANO1-AS2
LocusID (NCBI) 100009613
Atlas_Id 60376
Location 11q13.3  [Link to chromosome band 11q13]
Location_base_pair Starts at 70072434 and ends at 70075348 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANO1-AS2   33275
Cards
Entrez_Gene (NCBI)ANO1-AS2  100009613  ANO1 antisense RNA 2 (head to head)
AliasesC11orf78; NCRNA00224
GeneCards (Weizmann)ANO1-AS2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:70072434-70075348 [Contig_View]  ANO1-AS2 [Vega]
TCGA cBioPortalANO1-AS2
AceView (NCBI)ANO1-AS2
Genatlas (Paris)ANO1-AS2
WikiGenes100009613
SOURCE (Princeton)ANO1-AS2
Genetics Home Reference (NIH)ANO1-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)ANO1-AS2  -     chr11:70072434-70075348 -  11q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANO1-AS2  -     11q13.3   [Description]    (hg19-Feb_2009)
EnsemblANO1-AS2 - 11q13.3 [CytoView hg19]  ANO1-AS2 - 11q13.3 [CytoView hg38]
Mapping of homologs : NCBIANO1-AS2 [Mapview hg19]  ANO1-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW592641 EF419887 HY053628
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANO1-AS2
Cluster EST : UnigeneHs.743025 [ NCBI ]
CGAP (NCI)Hs.743025
Gene ExpressionANO1-AS2 [ NCBI-GEO ]   ANO1-AS2 [ EBI - ARRAY_EXPRESS ]   ANO1-AS2 [ SEEK ]   ANO1-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)ANO1-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100009613
GTEX Portal (Tissue expression)ANO1-AS2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ANO1-AS2
DMDM Disease mutations100009613
Blocks (Seattle)ANO1-AS2
Protein Interaction databases
BioGRIDANO1-AS2
STRING (EMBL)ANO1-AS2
ZODIACANO1-AS2
Ontologies - Pathways
Huge Navigator ANO1-AS2 [HugePedia]
snp3D : Map Gene to Disease100009613
BioCentury BCIQANO1-AS2
ClinGenANO1-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100009613
Chemical/Pharm GKB GenePA165543518
Clinical trialANO1-AS2
Miscellaneous
canSAR (ICR)ANO1-AS2 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineANO1-AS2
EVEXANO1-AS2
GoPubMedANO1-AS2
iHOPANO1-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Nov 21 13:22:59 CET 2017

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