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ANO10 (anoctamin 10)

Identity

Alias_namesTMEM16K
transmembrane protein 16K
Alias_symbol (synonym)FLJ10375
MGC47890
SCAR10
Other alias
HGNC (Hugo) ANO10
LocusID (NCBI) 55129
Atlas_Id 60375
Location 3p22.1  [Link to chromosome band 3p22]
Location_base_pair Starts at 43366326 and ends at 43622077 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ANO10 (3p22.1) / ANO10 (3p22.1)ANO10 (3p22.1) / DBN1 (5q35.3)ARHGEF3 (3p14.3) / ANO10 (3p22.1)
KPNA4 (3q25.33) / ANO10 (3p22.1)ULK4 (3p22.1) / ANO10 (3p22.1)ARHGEF3 ANO10
ULK4 ANO10

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANO10   25519
Cards
Entrez_Gene (NCBI)ANO10  55129  anoctamin 10
AliasesSCAR10; TMEM16K
GeneCards (Weizmann)ANO10
Ensembl hg19 (Hinxton)ENSG00000160746 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160746 [Gene_View]  chr3:43366326-43622077 [Contig_View]  ANO10 [Vega]
ICGC DataPortalENSG00000160746
TCGA cBioPortalANO10
AceView (NCBI)ANO10
Genatlas (Paris)ANO10
WikiGenes55129
SOURCE (Princeton)ANO10
Genetics Home Reference (NIH)ANO10
Genomic and cartography
GoldenPath hg38 (UCSC)ANO10  -     chr3:43366326-43622077 -  3p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANO10  -     3p22.1   [Description]    (hg19-Feb_2009)
EnsemblANO10 - 3p22.1 [CytoView hg19]  ANO10 - 3p22.1 [CytoView hg38]
Mapping of homologs : NCBIANO10 [Mapview hg19]  ANO10 [Mapview hg38]
OMIM613726   613728   
Gene and transcription
Genbank (Entrez)AA252209 AK096302 AK131223 AK292368 AK295969
RefSeq transcript (Entrez)NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_001346463 NM_001346464 NM_001346465 NM_001346466 NM_001346467 NM_001346468 NM_001346469 NM_018075
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANO10
Cluster EST : UnigeneHs.656657 [ NCBI ]
CGAP (NCI)Hs.656657
Alternative Splicing GalleryENSG00000160746
Gene ExpressionANO10 [ NCBI-GEO ]   ANO10 [ EBI - ARRAY_EXPRESS ]   ANO10 [ SEEK ]   ANO10 [ MEM ]
Gene Expression Viewer (FireBrowse)ANO10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55129
GTEX Portal (Tissue expression)ANO10
Human Protein AtlasENSG00000160746-ANO10 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NW15   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NW15  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NW15
Splice isoforms : SwissVarQ9NW15
PhosPhoSitePlusQ9NW15
Domains : Interpro (EBI)Anoctamin    Anoctamin-10   
Domain families : Pfam (Sanger)Anoctamin (PF04547)   
Domain families : Pfam (NCBI)pfam04547   
Conserved Domain (NCBI)ANO10
DMDM Disease mutations55129
Blocks (Seattle)ANO10
SuperfamilyQ9NW15
Human Protein Atlas [tissue]ENSG00000160746-ANO10 [tissue]
Peptide AtlasQ9NW15
HPRD07667
IPIIPI00794169   IPI00797182   IPI00902435   IPI00908702   IPI00925510   IPI00925729   IPI00925930   IPI00926133   IPI00926435   IPI00927521   IPI00926850   IPI00926219   IPI00927370   IPI00924960   
Protein Interaction databases
DIP (DOE-UCLA)Q9NW15
IntAct (EBI)Q9NW15
FunCoupENSG00000160746
BioGRIDANO10
STRING (EMBL)ANO10
ZODIACANO10
Ontologies - Pathways
QuickGOQ9NW15
Ontology : AmiGOcalcium activated cation channel activity  intracellular calcium activated chloride channel activity  intracellular calcium activated chloride channel activity  intracellular calcium activated chloride channel activity  intracellular  plasma membrane  plasma membrane  cation transport  chloride transport  membrane  integral component of membrane  ion transmembrane transport  cation transmembrane transport  chloride transmembrane transport  
Ontology : EGO-EBIcalcium activated cation channel activity  intracellular calcium activated chloride channel activity  intracellular calcium activated chloride channel activity  intracellular calcium activated chloride channel activity  intracellular  plasma membrane  plasma membrane  cation transport  chloride transport  membrane  integral component of membrane  ion transmembrane transport  cation transmembrane transport  chloride transmembrane transport  
NDEx NetworkANO10
Atlas of Cancer Signalling NetworkANO10
Wikipedia pathwaysANO10
Orthology - Evolution
OrthoDB55129
GeneTree (enSembl)ENSG00000160746
Phylogenetic Trees/Animal Genes : TreeFamANO10
HOVERGENQ9NW15
HOGENOMQ9NW15
Homologs : HomoloGeneANO10
Homology/Alignments : Family Browser (UCSC)ANO10
Gene fusions - Rearrangements
Fusion: TCGA_MDACCARHGEF3 ANO10
Fusion: TCGA_MDACCULK4 ANO10
Tumor Fusion PortalANO10
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANO10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANO10
dbVarANO10
ClinVarANO10
1000_GenomesANO10 
Exome Variant ServerANO10
ExAC (Exome Aggregation Consortium)ENSG00000160746
GNOMAD BrowserENSG00000160746
Genetic variants : HAPMAP55129
Genomic Variants (DGV)ANO10 [DGVbeta]
DECIPHERANO10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANO10 
Mutations
ICGC Data PortalANO10 
TCGA Data PortalANO10 
Broad Tumor PortalANO10
OASIS PortalANO10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANO10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANO10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANO10
DgiDB (Drug Gene Interaction Database)ANO10
DoCM (Curated mutations)ANO10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANO10 (select a term)
intoGenANO10
Cancer3DANO10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613726    613728   
Orphanet20593   
DisGeNETANO10
MedgenANO10
Genetic Testing Registry ANO10
NextProtQ9NW15 [Medical]
TSGene55129
GENETestsANO10
Target ValidationANO10
Huge Navigator ANO10 [HugePedia]
snp3D : Map Gene to Disease55129
BioCentury BCIQANO10
ClinGenANO10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55129
Chemical/Pharm GKB GenePA164715433
Clinical trialANO10
Miscellaneous
canSAR (ICR)ANO10 (select the gene name)
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANO10
EVEXANO10
GoPubMedANO10
iHOPANO10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:06:58 CET 2017

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