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ANO3 (anoctamin 3)

Identity

Alias_namesC11orf25
TMEM16C
chromosome 11 open reading frame 25
transmembrane protein 16C
Alias_symbol (synonym)GENX-3947
DYT23
Other aliasDYT24
HGNC (Hugo) ANO3
LocusID (NCBI) 63982
Atlas_Id 60377
Location 11p14.3  [Link to chromosome band 11p14]
Location_base_pair Starts at 26189123 and ends at 26663289 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ALKBH3 (11p11.2) / ANO3 (11p14.2)ANO3 (11p14.2) / ANO3 (11p14.2)SMG1 (16p12.3) / ANO3 (11p14.2)
SMG1 ANO3ALKBH3 ANO3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANO3   14004
Cards
Entrez_Gene (NCBI)ANO3  63982  anoctamin 3
AliasesC11orf25; DYT23; DYT24; GENX-3947; 
TMEM16C
GeneCards (Weizmann)ANO3
Ensembl hg19 (Hinxton)ENSG00000134343 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000134343 [Gene_View]  chr11:26189123-26663289 [Contig_View]  ANO3 [Vega]
ICGC DataPortalENSG00000134343
TCGA cBioPortalANO3
AceView (NCBI)ANO3
Genatlas (Paris)ANO3
WikiGenes63982
SOURCE (Princeton)ANO3
Genetics Home Reference (NIH)ANO3
Genomic and cartography
GoldenPath hg38 (UCSC)ANO3  -     chr11:26189123-26663289 +  11p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANO3  -     11p14.3   [Description]    (hg19-Feb_2009)
EnsemblANO3 - 11p14.3 [CytoView hg19]  ANO3 - 11p14.3 [CytoView hg38]
Mapping of homologs : NCBIANO3 [Mapview hg19]  ANO3 [Mapview hg38]
OMIM610110   615034   
Gene and transcription
Genbank (Entrez)AJ300461 AK295143 AK295658 AK295816 AK302659
RefSeq transcript (Entrez)NM_001313726 NM_001313727 NM_031418
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANO3
Cluster EST : UnigeneHs.577269 [ NCBI ]
CGAP (NCI)Hs.577269
Alternative Splicing GalleryENSG00000134343
Gene ExpressionANO3 [ NCBI-GEO ]   ANO3 [ EBI - ARRAY_EXPRESS ]   ANO3 [ SEEK ]   ANO3 [ MEM ]
Gene Expression Viewer (FireBrowse)ANO3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)63982
GTEX Portal (Tissue expression)ANO3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BYT9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BYT9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BYT9
Splice isoforms : SwissVarQ9BYT9
PhosPhoSitePlusQ9BYT9
Domains : Interpro (EBI)Anoct_dimer    Anoctamin    Anoctamin-3   
Domain families : Pfam (Sanger)Anoct_dimer (PF16178)    Anoctamin (PF04547)   
Domain families : Pfam (NCBI)pfam16178    pfam04547   
Conserved Domain (NCBI)ANO3
DMDM Disease mutations63982
Blocks (Seattle)ANO3
SuperfamilyQ9BYT9
Human Protein AtlasENSG00000134343
Peptide AtlasQ9BYT9
HPRD15526
IPIIPI00185058   IPI00981590   IPI01009261   IPI00977330   IPI00984456   
Protein Interaction databases
DIP (DOE-UCLA)Q9BYT9
IntAct (EBI)Q9BYT9
FunCoupENSG00000134343
BioGRIDANO3
STRING (EMBL)ANO3
ZODIACANO3
Ontologies - Pathways
QuickGOQ9BYT9
Ontology : AmiGOintracellular calcium activated chloride channel activity  intracellular calcium activated chloride channel activity  plasma membrane  lipid transport  integral component of membrane  detection of temperature stimulus  phospholipid scramblase activity  ion transmembrane transport  protein dimerization activity  detection of mechanical stimulus  calcium activated phosphatidylcholine scrambling  calcium activated galactosylceramide scrambling  chloride transmembrane transport  
Ontology : EGO-EBIintracellular calcium activated chloride channel activity  intracellular calcium activated chloride channel activity  plasma membrane  lipid transport  integral component of membrane  detection of temperature stimulus  phospholipid scramblase activity  ion transmembrane transport  protein dimerization activity  detection of mechanical stimulus  calcium activated phosphatidylcholine scrambling  calcium activated galactosylceramide scrambling  chloride transmembrane transport  
NDEx NetworkANO3
Atlas of Cancer Signalling NetworkANO3
Wikipedia pathwaysANO3
Orthology - Evolution
OrthoDB63982
GeneTree (enSembl)ENSG00000134343
Phylogenetic Trees/Animal Genes : TreeFamANO3
HOVERGENQ9BYT9
HOGENOMQ9BYT9
Homologs : HomoloGeneANO3
Homology/Alignments : Family Browser (UCSC)ANO3
Gene fusions - Rearrangements
Fusion: TCGASMG1 ANO3
Fusion: TCGAALKBH3 ANO3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANO3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANO3
dbVarANO3
ClinVarANO3
1000_GenomesANO3 
Exome Variant ServerANO3
ExAC (Exome Aggregation Consortium)ANO3 (select the gene name)
Genetic variants : HAPMAP63982
Genomic Variants (DGV)ANO3 [DGVbeta]
DECIPHERANO3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANO3 
Mutations
ICGC Data PortalANO3 
TCGA Data PortalANO3 
Broad Tumor PortalANO3
OASIS PortalANO3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANO3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANO3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANO3
DgiDB (Drug Gene Interaction Database)ANO3
DoCM (Curated mutations)ANO3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANO3 (select a term)
intoGenANO3
Cancer3DANO3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610110    615034   
Orphanet23108   
MedgenANO3
Genetic Testing Registry ANO3
NextProtQ9BYT9 [Medical]
TSGene63982
GENETestsANO3
Target ValidationANO3
Huge Navigator ANO3 [HugePedia]
snp3D : Map Gene to Disease63982
BioCentury BCIQANO3
ClinGenANO3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD63982
Chemical/Pharm GKB GenePA25489
Clinical trialANO3
Miscellaneous
canSAR (ICR)ANO3 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANO3
EVEXANO3
GoPubMedANO3
iHOPANO3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:28 CEST 2017

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