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ANP32C (acidic nuclear phosphoprotein 32 family member C)

Identity

Alias_namesacidic (leucine-rich) nuclear phosphoprotein 32 family
Alias_symbol (synonym)PP32R1
Other alias
HGNC (Hugo) ANP32C
LocusID (NCBI) 23520
Atlas_Id 649
Location 4q32.3  [Link to chromosome band 4q32]
Location_base_pair Starts at 165118159 and ends at 165118863 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANP32C   16675
Cards
Entrez_Gene (NCBI)ANP32C  23520  acidic nuclear phosphoprotein 32 family member C
AliasesPP32R1
GeneCards (Weizmann)ANP32C
Ensembl hg19 (Hinxton) [Gene_View]  chr4:165118159-165118863 [Contig_View]  ANP32C [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:165118159-165118863 [Contig_View]  ANP32C [Vega]
TCGA cBioPortalANP32C
AceView (NCBI)ANP32C
Genatlas (Paris)ANP32C
WikiGenes23520
SOURCE (Princeton)ANP32C
Genetics Home Reference (NIH)ANP32C
Genomic and cartography
GoldenPath hg19 (UCSC)ANP32C  -     chr4:165118159-165118863 -  4q32.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ANP32C  -     4q32.3   [Description]    (hg38-Dec_2013)
EnsemblANP32C - 4q32.3 [CytoView hg19]  ANP32C - 4q32.3 [CytoView hg38]
Mapping of homologs : NCBIANP32C [Mapview hg19]  ANP32C [Mapview hg38]
OMIM606877   
Gene and transcription
Genbank (Entrez)BC172312
RefSeq transcript (Entrez)NM_012403
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)ANP32C
Cluster EST : UnigeneHs.661161 [ NCBI ]
CGAP (NCI)Hs.661161
Gene ExpressionANP32C [ NCBI-GEO ]   ANP32C [ EBI - ARRAY_EXPRESS ]   ANP32C [ SEEK ]   ANP32C [ MEM ]
Gene Expression Viewer (FireBrowse)ANP32C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23520
GTEX Portal (Tissue expression)ANP32C
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43423   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO43423  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO43423
Splice isoforms : SwissVarO43423
PhosPhoSitePlusO43423
Domaine pattern : Prosite (Expaxy)LRR (PS51450)   
Domains : Interpro (EBI)L_dom-like    Leu-rich_rpt    Leu-rich_rpt_4   
Domain families : Pfam (Sanger)LRR_4 (PF12799)   
Domain families : Pfam (NCBI)pfam12799   
Conserved Domain (NCBI)ANP32C
DMDM Disease mutations23520
Blocks (Seattle)ANP32C
SuperfamilyO43423
Peptide AtlasO43423
HPRD06045
IPIIPI00018262   
Protein Interaction databases
DIP (DOE-UCLA)O43423
IntAct (EBI)O43423
BioGRIDANP32C
STRING (EMBL)ANP32C
ZODIACANP32C
Ontologies - Pathways
QuickGOO43423
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkANP32C
Atlas of Cancer Signalling NetworkANP32C
Wikipedia pathwaysANP32C
Orthology - Evolution
OrthoDB23520
Phylogenetic Trees/Animal Genes : TreeFamANP32C
HOVERGENO43423
HOGENOMO43423
Homologs : HomoloGeneANP32C
Homology/Alignments : Family Browser (UCSC)ANP32C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANP32C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANP32C
dbVarANP32C
ClinVarANP32C
1000_GenomesANP32C 
Exome Variant ServerANP32C
ExAC (Exome Aggregation Consortium)ANP32C (select the gene name)
Genetic variants : HAPMAP23520
Genomic Variants (DGV)ANP32C [DGVbeta]
DECIPHER (Syndromes)4:165118159-165118863  
CONAN: Copy Number AnalysisANP32C 
Mutations
ICGC Data PortalANP32C 
TCGA Data PortalANP32C 
Broad Tumor PortalANP32C
OASIS PortalANP32C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANP32C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANP32C
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
BioMutasearch ANP32C
DgiDB (Drug Gene Interaction Database)ANP32C
DoCM (Curated mutations)ANP32C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANP32C (select a term)
intoGenANP32C
Cancer3DANP32C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606877   
Orphanet
MedgenANP32C
Genetic Testing Registry ANP32C
NextProtO43423 [Medical]
TSGene23520
GENETestsANP32C
Huge Navigator ANP32C [HugePedia]
snp3D : Map Gene to Disease23520
BioCentury BCIQANP32C
ClinGenANP32C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23520
Chemical/Pharm GKB GenePA24813
Clinical trialANP32C
Miscellaneous
canSAR (ICR)ANP32C (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANP32C
EVEXANP32C
GoPubMedANP32C
iHOPANP32C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:52:29 CEST 2017

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