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ANP32D (acidic nuclear phosphoprotein 32 family member D)

Identity

Alias_namesacidic (leucine-rich) nuclear phosphoprotein 32 family
Alias_symbol (synonym)PP32R2
Other alias
HGNC (Hugo) ANP32D
LocusID (NCBI) 23519
Atlas_Id 650
Location 12q13.11  [Link to chromosome band 12q13]
Location_base_pair Starts at 48866448 and ends at 48866843 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANP32D   16676
Cards
Entrez_Gene (NCBI)ANP32D  23519  acidic nuclear phosphoprotein 32 family member D
AliasesPP32R2
GeneCards (Weizmann)ANP32D
Ensembl hg19 (Hinxton)ENSG00000139223 [Gene_View]  chr12:48866448-48866843 [Contig_View]  ANP32D [Vega]
Ensembl hg38 (Hinxton)ENSG00000139223 [Gene_View]  chr12:48866448-48866843 [Contig_View]  ANP32D [Vega]
ICGC DataPortalENSG00000139223
TCGA cBioPortalANP32D
AceView (NCBI)ANP32D
Genatlas (Paris)ANP32D
WikiGenes23519
SOURCE (Princeton)ANP32D
Genetics Home Reference (NIH)ANP32D
Genomic and cartography
GoldenPath hg19 (UCSC)ANP32D  -     chr12:48866448-48866843 +  12q13.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ANP32D  -     12q13.11   [Description]    (hg38-Dec_2013)
EnsemblANP32D - 12q13.11 [CytoView hg19]  ANP32D - 12q13.11 [CytoView hg38]
Mapping of homologs : NCBIANP32D [Mapview hg19]  ANP32D [Mapview hg38]
OMIM606878   
Gene and transcription
Genbank (Entrez)BC069122
RefSeq transcript (Entrez)NM_012404
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_029419 NW_004929384
Consensus coding sequences : CCDS (NCBI)ANP32D
Cluster EST : UnigeneHs.532658 [ NCBI ]
CGAP (NCI)Hs.532658
Alternative Splicing GalleryENSG00000139223
Gene ExpressionANP32D [ NCBI-GEO ]   ANP32D [ EBI - ARRAY_EXPRESS ]   ANP32D [ SEEK ]   ANP32D [ MEM ]
Gene Expression Viewer (FireBrowse)ANP32D [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23519
GTEX Portal (Tissue expression)ANP32D
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95626   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95626  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95626
Splice isoforms : SwissVarO95626
PhosPhoSitePlusO95626
Domaine pattern : Prosite (Expaxy)LRR (PS51450)   
Domains : Interpro (EBI)L_dom-like    Leu-rich_rpt    Leu-rich_rpt_4   
Domain families : Pfam (Sanger)LRR_4 (PF12799)   
Domain families : Pfam (NCBI)pfam12799   
Conserved Domain (NCBI)ANP32D
DMDM Disease mutations23519
Blocks (Seattle)ANP32D
SuperfamilyO95626
Human Protein AtlasENSG00000139223
Peptide AtlasO95626
HPRD06046
IPIIPI00172487   
Protein Interaction databases
DIP (DOE-UCLA)O95626
IntAct (EBI)O95626
FunCoupENSG00000139223
BioGRIDANP32D
STRING (EMBL)ANP32D
ZODIACANP32D
Ontologies - Pathways
QuickGOO95626
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkANP32D
Atlas of Cancer Signalling NetworkANP32D
Wikipedia pathwaysANP32D
Orthology - Evolution
OrthoDB23519
GeneTree (enSembl)ENSG00000139223
Phylogenetic Trees/Animal Genes : TreeFamANP32D
HOVERGENO95626
HOGENOMO95626
Homologs : HomoloGeneANP32D
Homology/Alignments : Family Browser (UCSC)ANP32D
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANP32D [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANP32D
dbVarANP32D
ClinVarANP32D
1000_GenomesANP32D 
Exome Variant ServerANP32D
ExAC (Exome Aggregation Consortium)ANP32D (select the gene name)
Genetic variants : HAPMAP23519
Genomic Variants (DGV)ANP32D [DGVbeta]
DECIPHER (Syndromes)12:48866448-48866843  ENSG00000139223
CONAN: Copy Number AnalysisANP32D 
Mutations
ICGC Data PortalANP32D 
TCGA Data PortalANP32D 
Broad Tumor PortalANP32D
OASIS PortalANP32D [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANP32D  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANP32D
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANP32D
DgiDB (Drug Gene Interaction Database)ANP32D
DoCM (Curated mutations)ANP32D (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANP32D (select a term)
intoGenANP32D
Cancer3DANP32D(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606878   
Orphanet
MedgenANP32D
Genetic Testing Registry ANP32D
NextProtO95626 [Medical]
TSGene23519
GENETestsANP32D
Huge Navigator ANP32D [HugePedia]
snp3D : Map Gene to Disease23519
BioCentury BCIQANP32D
ClinGenANP32D
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23519
Chemical/Pharm GKB GenePA24814
Clinical trialANP32D
Miscellaneous
canSAR (ICR)ANP32D (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANP32D
EVEXANP32D
GoPubMedANP32D
iHOPANP32D
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:52:29 CEST 2017

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