Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ANP32E (acidic nuclear phosphoprotein 32 family member E)

Identity

Alias_namesacidic (leucine-rich) nuclear phosphoprotein 32 family
Alias_symbol (synonym)LANPL
MGC5350
LANP-L
Other alias
HGNC (Hugo) ANP32E
LocusID (NCBI) 81611
Atlas_Id 54129
Location 1q21.2  [Link to chromosome band 1q21]
Location_base_pair Starts at 150218417 and ends at 150236156 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ANP32E (1q21.2) / ANP32B (9q22.33)ANP32E (1q21.2) / CTSK (1q21.3)ANP32E (1q21.2) / EDEM1 (3p26.1)
ANP32E (1q21.2) / FAM13A-AS1 (4q22.1)ANP32E (1q21.2) / GOLPH3L (1q21.3)ANP32E (1q21.2) / KAT6B (10q22.2)
ANP32E (1q21.2) / PTMA (2q37.1)NRP1 (10p11.22) / ANP32E (1q21.2)SET (9q34.11) / ANP32E (1q21.2)
ANP32E 1q21.2 / CTSK 1q21.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANP32E   16673
Cards
Entrez_Gene (NCBI)ANP32E  81611  acidic nuclear phosphoprotein 32 family member E
AliasesLANP-L; LANPL
GeneCards (Weizmann)ANP32E
Ensembl hg19 (Hinxton)ENSG00000143401 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000143401 [Gene_View]  chr1:150218417-150236156 [Contig_View]  ANP32E [Vega]
ICGC DataPortalENSG00000143401
TCGA cBioPortalANP32E
AceView (NCBI)ANP32E
Genatlas (Paris)ANP32E
WikiGenes81611
SOURCE (Princeton)ANP32E
Genetics Home Reference (NIH)ANP32E
Genomic and cartography
GoldenPath hg38 (UCSC)ANP32E  -     chr1:150218417-150236156 -  1q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANP32E  -     1q21.2   [Description]    (hg19-Feb_2009)
EnsemblANP32E - 1q21.2 [CytoView hg19]  ANP32E - 1q21.2 [CytoView hg38]
Mapping of homologs : NCBIANP32E [Mapview hg19]  ANP32E [Mapview hg38]
OMIM609611   
Gene and transcription
Genbank (Entrez)AK025624 AK092672 AK095228 AK223469 AK303333
RefSeq transcript (Entrez)NM_001136478 NM_001136479 NM_001280559 NM_001280560 NM_030920
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANP32E
Cluster EST : UnigeneHs.656466 [ NCBI ]
CGAP (NCI)Hs.656466
Alternative Splicing GalleryENSG00000143401
Gene ExpressionANP32E [ NCBI-GEO ]   ANP32E [ EBI - ARRAY_EXPRESS ]   ANP32E [ SEEK ]   ANP32E [ MEM ]
Gene Expression Viewer (FireBrowse)ANP32E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)81611
GTEX Portal (Tissue expression)ANP32E
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BTT0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BTT0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BTT0
Splice isoforms : SwissVarQ9BTT0
PhosPhoSitePlusQ9BTT0
Domaine pattern : Prosite (Expaxy)LRR (PS51450)   
Domains : Interpro (EBI)L_dom-like    Leu-rich_rpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ANP32E
DMDM Disease mutations81611
Blocks (Seattle)ANP32E
PDB (SRS)4CAY    4NFT   
PDB (PDBSum)4CAY    4NFT   
PDB (IMB)4CAY    4NFT   
PDB (RSDB)4CAY    4NFT   
Structural Biology KnowledgeBase4CAY    4NFT   
SCOP (Structural Classification of Proteins)4CAY    4NFT   
CATH (Classification of proteins structures)4CAY    4NFT   
SuperfamilyQ9BTT0
Human Protein AtlasENSG00000143401
Peptide AtlasQ9BTT0
HPRD16493
IPIIPI00165393   IPI00640833   IPI00514758   IPI00514333   IPI00910661   IPI00979435   IPI00910423   IPI00976349   IPI00977329   
Protein Interaction databases
DIP (DOE-UCLA)Q9BTT0
IntAct (EBI)Q9BTT0
FunCoupENSG00000143401
BioGRIDANP32E
STRING (EMBL)ANP32E
ZODIACANP32E
Ontologies - Pathways
QuickGOQ9BTT0
Ontology : AmiGOSwr1 complex  nucleus  nucleus  covalent chromatin modification  phosphatase inhibitor activity  cytoplasmic vesicle  histone binding  negative regulation of catalytic activity  histone exchange  
Ontology : EGO-EBISwr1 complex  nucleus  nucleus  covalent chromatin modification  phosphatase inhibitor activity  cytoplasmic vesicle  histone binding  negative regulation of catalytic activity  histone exchange  
NDEx NetworkANP32E
Atlas of Cancer Signalling NetworkANP32E
Wikipedia pathwaysANP32E
Orthology - Evolution
OrthoDB81611
GeneTree (enSembl)ENSG00000143401
Phylogenetic Trees/Animal Genes : TreeFamANP32E
HOVERGENQ9BTT0
HOGENOMQ9BTT0
Homologs : HomoloGeneANP32E
Homology/Alignments : Family Browser (UCSC)ANP32E
Gene fusions - Rearrangements
Fusion : MitelmanANP32E/CTSK [1q21.2/1q21.3]  
Fusion : MitelmanANP32E/KAT6B [1q21.2/10q22.2]  [t(1;10)(q21;q22)]  
Fusion: TCGAANP32E 1q21.2 CTSK 1q21.3 OV
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANP32E [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANP32E
dbVarANP32E
ClinVarANP32E
1000_GenomesANP32E 
Exome Variant ServerANP32E
ExAC (Exome Aggregation Consortium)ANP32E (select the gene name)
Genetic variants : HAPMAP81611
Genomic Variants (DGV)ANP32E [DGVbeta]
DECIPHERANP32E [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANP32E 
Mutations
ICGC Data PortalANP32E 
TCGA Data PortalANP32E 
Broad Tumor PortalANP32E
OASIS PortalANP32E [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANP32E  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANP32E
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANP32E
DgiDB (Drug Gene Interaction Database)ANP32E
DoCM (Curated mutations)ANP32E (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANP32E (select a term)
intoGenANP32E
Cancer3DANP32E(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609611   
Orphanet
MedgenANP32E
Genetic Testing Registry ANP32E
NextProtQ9BTT0 [Medical]
TSGene81611
GENETestsANP32E
Target ValidationANP32E
Huge Navigator ANP32E [HugePedia]
snp3D : Map Gene to Disease81611
BioCentury BCIQANP32E
ClinGenANP32E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD81611
Chemical/Pharm GKB GenePA134880751
Clinical trialANP32E
Miscellaneous
canSAR (ICR)ANP32E (select the gene name)
Probes
Litterature
PubMed35 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANP32E
EVEXANP32E
GoPubMedANP32E
iHOPANP32E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 16:55:02 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.