Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ANXA10 (annexin A10)

Identity

Alias_symbol (synonym)ANX14
Other alias
HGNC (Hugo) ANXA10
LocusID (NCBI) 11199
Atlas_Id 51140
Location 4q32.3  [Link to chromosome band 4q32]
Location_base_pair Starts at 168092537 and ends at 168187742 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ANXA10 (4q32.3) / FAM198B (4q32.1)ANXA10 4q32.3 / FAM198B 4q32.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANXA10   534
Cards
Entrez_Gene (NCBI)ANXA10  11199  annexin A10
AliasesANX14
GeneCards (Weizmann)ANXA10
Ensembl hg19 (Hinxton)ENSG00000109511 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000109511 [Gene_View]  chr4:168092537-168187742 [Contig_View]  ANXA10 [Vega]
ICGC DataPortalENSG00000109511
TCGA cBioPortalANXA10
AceView (NCBI)ANXA10
Genatlas (Paris)ANXA10
WikiGenes11199
SOURCE (Princeton)ANXA10
Genetics Home Reference (NIH)ANXA10
Genomic and cartography
GoldenPath hg38 (UCSC)ANXA10  -     chr4:168092537-168187742 +  4q32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANXA10  -     4q32.3   [Description]    (hg19-Feb_2009)
EnsemblANXA10 - 4q32.3 [CytoView hg19]  ANXA10 - 4q32.3 [CytoView hg38]
Mapping of homologs : NCBIANXA10 [Mapview hg19]  ANXA10 [Mapview hg38]
OMIM608008   
Gene and transcription
Genbank (Entrez)AF196478 AJ238979 AY626137 BC007320 BM768053
RefSeq transcript (Entrez)NM_007193
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANXA10
Cluster EST : UnigeneHs.188401 [ NCBI ]
CGAP (NCI)Hs.188401
Alternative Splicing GalleryENSG00000109511
Gene ExpressionANXA10 [ NCBI-GEO ]   ANXA10 [ EBI - ARRAY_EXPRESS ]   ANXA10 [ SEEK ]   ANXA10 [ MEM ]
Gene Expression Viewer (FireBrowse)ANXA10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11199
GTEX Portal (Tissue expression)ANXA10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UJ72   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UJ72  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UJ72
Splice isoforms : SwissVarQ9UJ72
PhosPhoSitePlusQ9UJ72
Domaine pattern : Prosite (Expaxy)ANNEXIN (PS00223)   
Domains : Interpro (EBI)Annexin    Annexin_repeat    Annexin_repeat_CS    ANX10   
Domain families : Pfam (Sanger)Annexin (PF00191)   
Domain families : Pfam (NCBI)pfam00191   
Domain families : Smart (EMBL)ANX (SM00335)  
Conserved Domain (NCBI)ANXA10
DMDM Disease mutations11199
Blocks (Seattle)ANXA10
SuperfamilyQ9UJ72
Human Protein AtlasENSG00000109511
Peptide AtlasQ9UJ72
HPRD09724
IPIIPI00296528   IPI00873355   
Protein Interaction databases
DIP (DOE-UCLA)Q9UJ72
IntAct (EBI)Q9UJ72
FunCoupENSG00000109511
BioGRIDANXA10
STRING (EMBL)ANXA10
ZODIACANXA10
Ontologies - Pathways
QuickGOQ9UJ72
Ontology : AmiGOcalcium ion binding  protein binding  calcium-dependent phospholipid binding  mitochondrion  
Ontology : EGO-EBIcalcium ion binding  protein binding  calcium-dependent phospholipid binding  mitochondrion  
NDEx NetworkANXA10
Atlas of Cancer Signalling NetworkANXA10
Wikipedia pathwaysANXA10
Orthology - Evolution
OrthoDB11199
GeneTree (enSembl)ENSG00000109511
Phylogenetic Trees/Animal Genes : TreeFamANXA10
HOVERGENQ9UJ72
HOGENOMQ9UJ72
Homologs : HomoloGeneANXA10
Homology/Alignments : Family Browser (UCSC)ANXA10
Gene fusions - Rearrangements
Fusion : MitelmanANXA10/FAM198B [4q32.3/4q32.1]  
Fusion: TCGAANXA10 4q32.3 FAM198B 4q32.1 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANXA10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANXA10
dbVarANXA10
ClinVarANXA10
1000_GenomesANXA10 
Exome Variant ServerANXA10
ExAC (Exome Aggregation Consortium)ANXA10 (select the gene name)
Genetic variants : HAPMAP11199
Genomic Variants (DGV)ANXA10 [DGVbeta]
DECIPHERANXA10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANXA10 
Mutations
ICGC Data PortalANXA10 
TCGA Data PortalANXA10 
Broad Tumor PortalANXA10
OASIS PortalANXA10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANXA10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANXA10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANXA10
DgiDB (Drug Gene Interaction Database)ANXA10
DoCM (Curated mutations)ANXA10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANXA10 (select a term)
intoGenANXA10
Cancer3DANXA10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608008   
Orphanet
MedgenANXA10
Genetic Testing Registry ANXA10
NextProtQ9UJ72 [Medical]
TSGene11199
GENETestsANXA10
Target ValidationANXA10
Huge Navigator ANXA10 [HugePedia]
snp3D : Map Gene to Disease11199
BioCentury BCIQANXA10
ClinGenANXA10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11199
Chemical/Pharm GKB GenePA24824
Clinical trialANXA10
Miscellaneous
canSAR (ICR)ANXA10 (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANXA10
EVEXANXA10
GoPubMedANXA10
iHOPANXA10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:23:51 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.