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ANXA11 (annexin A11)

Identity

Alias_namesANX11
Other aliasCAP50
HGNC (Hugo) ANXA11
LocusID (NCBI) 311
Atlas_Id 51241
Location 10q22.3  [Link to chromosome band 10q22]
Location_base_pair Starts at 81914880 and ends at 81965328 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
S100A8 (1q21.3) / ANXA11 (10q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANXA11   535
Cards
Entrez_Gene (NCBI)ANXA11  311  annexin A11
AliasesANX11; CAP50
GeneCards (Weizmann)ANXA11
Ensembl hg19 (Hinxton)ENSG00000122359 [Gene_View]  chr10:81914880-81965328 [Contig_View]  ANXA11 [Vega]
Ensembl hg38 (Hinxton)ENSG00000122359 [Gene_View]  chr10:81914880-81965328 [Contig_View]  ANXA11 [Vega]
ICGC DataPortalENSG00000122359
TCGA cBioPortalANXA11
AceView (NCBI)ANXA11
Genatlas (Paris)ANXA11
WikiGenes311
SOURCE (Princeton)ANXA11
Genetics Home Reference (NIH)ANXA11
Genomic and cartography
GoldenPath hg19 (UCSC)ANXA11  -     chr10:81914880-81965328 -  10q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ANXA11  -     10q22.3   [Description]    (hg38-Dec_2013)
EnsemblANXA11 - 10q22.3 [CytoView hg19]  ANXA11 - 10q22.3 [CytoView hg38]
Mapping of homologs : NCBIANXA11 [Mapview hg19]  ANXA11 [Mapview hg38]
OMIM602572   
Gene and transcription
Genbank (Entrez)AB209770 AJ278463 AJ278464 AJ278465 AK000567
RefSeq transcript (Entrez)NM_001157 NM_001278407 NM_001278408 NM_001278409 NM_145868 NM_145869
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)ANXA11
Cluster EST : UnigeneHs.530291 [ NCBI ]
CGAP (NCI)Hs.530291
Alternative Splicing GalleryENSG00000122359
Gene ExpressionANXA11 [ NCBI-GEO ]   ANXA11 [ EBI - ARRAY_EXPRESS ]   ANXA11 [ SEEK ]   ANXA11 [ MEM ]
Gene Expression Viewer (FireBrowse)ANXA11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)311
GTEX Portal (Tissue expression)ANXA11
Protein : pattern, domain, 3D structure
UniProt/SwissProtP50995   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP50995  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP50995
Splice isoforms : SwissVarP50995
PhosPhoSitePlusP50995
Domaine pattern : Prosite (Expaxy)ANNEXIN (PS00223)   
Domains : Interpro (EBI)Annexin    Annexin_repeat    Annexin_repeat_CS    AnnexinXI   
Domain families : Pfam (Sanger)Annexin (PF00191)   
Domain families : Pfam (NCBI)pfam00191   
Domain families : Smart (EMBL)ANX (SM00335)  
Conserved Domain (NCBI)ANXA11
DMDM Disease mutations311
Blocks (Seattle)ANXA11
SuperfamilyP50995
Human Protein AtlasENSG00000122359
Peptide AtlasP50995
HPRD03983
IPIIPI01010055   IPI00414320   IPI00909703   IPI00552303   IPI00647738   IPI00644179   
Protein Interaction databases
DIP (DOE-UCLA)P50995
IntAct (EBI)P50995
FunCoupENSG00000122359
BioGRIDANXA11
STRING (EMBL)ANXA11
ZODIACANXA11
Ontologies - Pathways
QuickGOP50995
Ontology : AmiGOcalcium ion binding  protein binding  calcium-dependent phospholipid binding  nuclear envelope  nuclear envelope  nucleoplasm  nucleoplasm  cytoplasm  spindle  phagocytosis  cell cycle  phosphatidylethanolamine binding  membrane  MHC class II protein complex binding  midbody  melanosome  specific granule  azurophil granule  S100 protein binding  poly(A) RNA binding  phagocytic vesicle  calcium-dependent protein binding  cell division  response to calcium ion  extracellular exosome  
Ontology : EGO-EBIcalcium ion binding  protein binding  calcium-dependent phospholipid binding  nuclear envelope  nuclear envelope  nucleoplasm  nucleoplasm  cytoplasm  spindle  phagocytosis  cell cycle  phosphatidylethanolamine binding  membrane  MHC class II protein complex binding  midbody  melanosome  specific granule  azurophil granule  S100 protein binding  poly(A) RNA binding  phagocytic vesicle  calcium-dependent protein binding  cell division  response to calcium ion  extracellular exosome  
NDEx NetworkANXA11
Atlas of Cancer Signalling NetworkANXA11
Wikipedia pathwaysANXA11
Orthology - Evolution
OrthoDB311
GeneTree (enSembl)ENSG00000122359
Phylogenetic Trees/Animal Genes : TreeFamANXA11
HOVERGENP50995
HOGENOMP50995
Homologs : HomoloGeneANXA11
Homology/Alignments : Family Browser (UCSC)ANXA11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANXA11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANXA11
dbVarANXA11
ClinVarANXA11
1000_GenomesANXA11 
Exome Variant ServerANXA11
ExAC (Exome Aggregation Consortium)ANXA11 (select the gene name)
Genetic variants : HAPMAP311
Genomic Variants (DGV)ANXA11 [DGVbeta]
DECIPHER (Syndromes)10:81914880-81965328  ENSG00000122359
CONAN: Copy Number AnalysisANXA11 
Mutations
ICGC Data PortalANXA11 
TCGA Data PortalANXA11 
Broad Tumor PortalANXA11
OASIS PortalANXA11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANXA11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANXA11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANXA11
DgiDB (Drug Gene Interaction Database)ANXA11
DoCM (Curated mutations)ANXA11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANXA11 (select a term)
intoGenANXA11
Cancer3DANXA11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602572   
Orphanet
MedgenANXA11
Genetic Testing Registry ANXA11
NextProtP50995 [Medical]
TSGene311
GENETestsANXA11
Huge Navigator ANXA11 [HugePedia]
snp3D : Map Gene to Disease311
BioCentury BCIQANXA11
ClinGenANXA11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD311
Chemical/Pharm GKB GenePA24825
Clinical trialANXA11
Miscellaneous
canSAR (ICR)ANXA11 (select the gene name)
Probes
Litterature
PubMed60 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANXA11
EVEXANXA11
GoPubMedANXA11
iHOPANXA11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:52:30 CEST 2017

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