Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ANXA8L1 (annexin A8 like 1)

Identity

Alias_namesANXA8L2
annexin A8-like 2
Alias_symbol (synonym)bA301J7.3
bA145E20.2
Other aliasANXA8
VAC-beta
HGNC (Hugo) ANXA8L1
LocusID (NCBI) 728113
Atlas_Id 53861
Location 10q11.22  [Link to chromosome band 10q11]
Location_base_pair Starts at 46375590 and ends at 46391783 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANXA8L1   23334
Cards
Entrez_Gene (NCBI)ANXA8L1  728113  annexin A8 like 1
AliasesANXA8; ANXA8L2; VAC-beta; bA145E20.2
GeneCards (Weizmann)ANXA8L1
Ensembl hg19 (Hinxton)ENSG00000264230 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000264230 [Gene_View]  chr10:46375590-46391783 [Contig_View]  ANXA8L1 [Vega]
ICGC DataPortalENSG00000264230
TCGA cBioPortalANXA8L1
AceView (NCBI)ANXA8L1
Genatlas (Paris)ANXA8L1
WikiGenes728113
SOURCE (Princeton)ANXA8L1
Genetics Home Reference (NIH)ANXA8L1
Genomic and cartography
GoldenPath hg38 (UCSC)ANXA8L1  -     chr10:46375590-46391783 +  10q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANXA8L1  -     10q11.22   [Description]    (hg19-Feb_2009)
EnsemblANXA8L1 - 10q11.22 [CytoView hg19]  ANXA8L1 - 10q11.22 [CytoView hg38]
Mapping of homologs : NCBIANXA8L1 [Mapview hg19]  ANXA8L1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK223149 AK300191 AK307182 AK313626 BC008813
RefSeq transcript (Entrez)NM_001039801 NM_001098845 NM_001278923 NM_001278924 NM_001630
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANXA8L1
Cluster EST : UnigeneHs.705389 [ NCBI ]
CGAP (NCI)Hs.705389
Alternative Splicing GalleryENSG00000264230
Gene ExpressionANXA8L1 [ NCBI-GEO ]   ANXA8L1 [ EBI - ARRAY_EXPRESS ]   ANXA8L1 [ SEEK ]   ANXA8L1 [ MEM ]
Gene Expression Viewer (FireBrowse)ANXA8L1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728113
GTEX Portal (Tissue expression)ANXA8L1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5VT79   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5VT79  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5VT79
Splice isoforms : SwissVarQ5VT79
PhosPhoSitePlusQ5VT79
Domaine pattern : Prosite (Expaxy)ANNEXIN (PS00223)   
Domains : Interpro (EBI)Annexin    Annexin_repeat    Annexin_repeat_CS    ANX8   
Domain families : Pfam (Sanger)Annexin (PF00191)   
Domain families : Pfam (NCBI)pfam00191   
Domain families : Smart (EMBL)ANX (SM00335)  
Conserved Domain (NCBI)ANXA8L1
DMDM Disease mutations728113
Blocks (Seattle)ANXA8L1
SuperfamilyQ5VT79
Human Protein AtlasENSG00000264230
Peptide AtlasQ5VT79
Protein Interaction databases
DIP (DOE-UCLA)Q5VT79
IntAct (EBI)Q5VT79
FunCoupENSG00000264230
BioGRIDANXA8L1
STRING (EMBL)ANXA8L1
ZODIACANXA8L1
Ontologies - Pathways
QuickGOQ5VT79
Ontology : AmiGOcalcium ion binding  calcium-dependent phospholipid binding  extracellular exosome  
Ontology : EGO-EBIcalcium ion binding  calcium-dependent phospholipid binding  extracellular exosome  
NDEx NetworkANXA8L1
Atlas of Cancer Signalling NetworkANXA8L1
Wikipedia pathwaysANXA8L1
Orthology - Evolution
OrthoDB728113
GeneTree (enSembl)ENSG00000264230
Phylogenetic Trees/Animal Genes : TreeFamANXA8L1
HOVERGENQ5VT79
HOGENOMQ5VT79
Homologs : HomoloGeneANXA8L1
Homology/Alignments : Family Browser (UCSC)ANXA8L1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANXA8L1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANXA8L1
dbVarANXA8L1
ClinVarANXA8L1
1000_GenomesANXA8L1 
Exome Variant ServerANXA8L1
ExAC (Exome Aggregation Consortium)ANXA8L1 (select the gene name)
Genetic variants : HAPMAP728113
Genomic Variants (DGV)ANXA8L1 [DGVbeta]
DECIPHERANXA8L1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANXA8L1 
Mutations
ICGC Data PortalANXA8L1 
TCGA Data PortalANXA8L1 
Broad Tumor PortalANXA8L1
OASIS PortalANXA8L1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDANXA8L1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANXA8L1
DgiDB (Drug Gene Interaction Database)ANXA8L1
DoCM (Curated mutations)ANXA8L1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANXA8L1 (select a term)
intoGenANXA8L1
Cancer3DANXA8L1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenANXA8L1
Genetic Testing Registry ANXA8L1
NextProtQ5VT79 [Medical]
TSGene728113
GENETestsANXA8L1
Target ValidationANXA8L1
Huge Navigator ANXA8L1 [HugePedia]
snp3D : Map Gene to Disease728113
BioCentury BCIQANXA8L1
ClinGenANXA8L1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728113
Chemical/Pharm GKB GenePA134881914
Clinical trialANXA8L1
Miscellaneous
canSAR (ICR)ANXA8L1 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANXA8L1
EVEXANXA8L1
GoPubMedANXA8L1
iHOPANXA8L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:23:53 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.