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ANXA9 (annexin A9)

Identity

Alias_namesANX31
Other alias
HGNC (Hugo) ANXA9
LocusID (NCBI) 8416
Atlas_Id 60389
Location 1q21.3  [Link to chromosome band 1q21]
Location_base_pair Starts at 150982023 and ends at 150995638 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ANXA9 (1q21.3) / MRPL9 (1q21.3)ANXA9 (1q21.3) / NUP210L (1q21.3)ANXA9 (1q21.3) / RPS6KA3 (Xp22.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ANXA9   547
Cards
Entrez_Gene (NCBI)ANXA9  8416  annexin A9
AliasesANX31
GeneCards (Weizmann)ANXA9
Ensembl hg19 (Hinxton)ENSG00000143412 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000143412 [Gene_View]  chr1:150982023-150995638 [Contig_View]  ANXA9 [Vega]
ICGC DataPortalENSG00000143412
TCGA cBioPortalANXA9
AceView (NCBI)ANXA9
Genatlas (Paris)ANXA9
WikiGenes8416
SOURCE (Princeton)ANXA9
Genetics Home Reference (NIH)ANXA9
Genomic and cartography
GoldenPath hg38 (UCSC)ANXA9  -     chr1:150982023-150995638 +  1q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ANXA9  -     1q21.3   [Description]    (hg19-Feb_2009)
EnsemblANXA9 - 1q21.3 [CytoView hg19]  ANXA9 - 1q21.3 [CytoView hg38]
Mapping of homologs : NCBIANXA9 [Mapview hg19]  ANXA9 [Mapview hg38]
OMIM603319   
Gene and transcription
Genbank (Entrez)AF230929 AJ009985 AK314926 BC005830 BJ993162
RefSeq transcript (Entrez)NM_003568
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ANXA9
Cluster EST : UnigeneHs.3346 [ NCBI ]
CGAP (NCI)Hs.3346
Alternative Splicing GalleryENSG00000143412
Gene ExpressionANXA9 [ NCBI-GEO ]   ANXA9 [ EBI - ARRAY_EXPRESS ]   ANXA9 [ SEEK ]   ANXA9 [ MEM ]
Gene Expression Viewer (FireBrowse)ANXA9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8416
GTEX Portal (Tissue expression)ANXA9
Protein : pattern, domain, 3D structure
UniProt/SwissProtO76027   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO76027  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO76027
Splice isoforms : SwissVarO76027
PhosPhoSitePlusO76027
Domaine pattern : Prosite (Expaxy)ANNEXIN (PS00223)   
Domains : Interpro (EBI)Annexin    Annexin_repeat    Annexin_repeat_CS    ANX9   
Domain families : Pfam (Sanger)Annexin (PF00191)   
Domain families : Pfam (NCBI)pfam00191   
Domain families : Smart (EMBL)ANX (SM00335)  
Conserved Domain (NCBI)ANXA9
DMDM Disease mutations8416
Blocks (Seattle)ANXA9
SuperfamilyO76027
Human Protein AtlasENSG00000143412
Peptide AtlasO76027
IPIIPI00008714   
Protein Interaction databases
DIP (DOE-UCLA)O76027
IntAct (EBI)O76027
FunCoupENSG00000143412
BioGRIDANXA9
STRING (EMBL)ANXA9
ZODIACANXA9
Ontologies - Pathways
QuickGOO76027
Ontology : AmiGOphosphatidylserine binding  calcium ion binding  protein binding  phospholipid binding  calcium-dependent phospholipid binding  cytosol  signal transduction  cell surface  acetylcholine receptor activity  single organismal cell-cell adhesion  protein homodimerization activity  extracellular exosome  
Ontology : EGO-EBIphosphatidylserine binding  calcium ion binding  protein binding  phospholipid binding  calcium-dependent phospholipid binding  cytosol  signal transduction  cell surface  acetylcholine receptor activity  single organismal cell-cell adhesion  protein homodimerization activity  extracellular exosome  
NDEx NetworkANXA9
Atlas of Cancer Signalling NetworkANXA9
Wikipedia pathwaysANXA9
Orthology - Evolution
OrthoDB8416
GeneTree (enSembl)ENSG00000143412
Phylogenetic Trees/Animal Genes : TreeFamANXA9
HOVERGENO76027
HOGENOMO76027
Homologs : HomoloGeneANXA9
Homology/Alignments : Family Browser (UCSC)ANXA9
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerANXA9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ANXA9
dbVarANXA9
ClinVarANXA9
1000_GenomesANXA9 
Exome Variant ServerANXA9
ExAC (Exome Aggregation Consortium)ANXA9 (select the gene name)
Genetic variants : HAPMAP8416
Genomic Variants (DGV)ANXA9 [DGVbeta]
DECIPHERANXA9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisANXA9 
Mutations
ICGC Data PortalANXA9 
TCGA Data PortalANXA9 
Broad Tumor PortalANXA9
OASIS PortalANXA9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICANXA9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDANXA9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ANXA9
DgiDB (Drug Gene Interaction Database)ANXA9
DoCM (Curated mutations)ANXA9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ANXA9 (select a term)
intoGenANXA9
Cancer3DANXA9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603319   
Orphanet
MedgenANXA9
Genetic Testing Registry ANXA9
NextProtO76027 [Medical]
TSGene8416
GENETestsANXA9
Target ValidationANXA9
Huge Navigator ANXA9 [HugePedia]
snp3D : Map Gene to Disease8416
BioCentury BCIQANXA9
ClinGenANXA9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8416
Chemical/Pharm GKB GenePA24837
Clinical trialANXA9
Miscellaneous
canSAR (ICR)ANXA9 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineANXA9
EVEXANXA9
GoPubMedANXA9
iHOPANXA9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:30 CEST 2017

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