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AP3B2 (adaptor related protein complex 3 beta 2 subunit)

Identity

Alias_namesadaptor-related protein complex 3, beta 2 subunit
Alias_symbol (synonym)NAPTB
Other aliasEIEE48
HGNC (Hugo) AP3B2
LocusID (NCBI) 8120
Atlas_Id 60403
Location 15q25.2  [Link to chromosome band 15q25]
Location_base_pair Starts at 82659281 and ends at 82709908 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AP3B2   567
Cards
Entrez_Gene (NCBI)AP3B2  8120  adaptor related protein complex 3 beta 2 subunit
AliasesEIEE48; NAPTB
GeneCards (Weizmann)AP3B2
Ensembl hg19 (Hinxton)ENSG00000103723 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000103723 [Gene_View]  chr15:82659281-82709908 [Contig_View]  AP3B2 [Vega]
ICGC DataPortalENSG00000103723
TCGA cBioPortalAP3B2
AceView (NCBI)AP3B2
Genatlas (Paris)AP3B2
WikiGenes8120
SOURCE (Princeton)AP3B2
Genetics Home Reference (NIH)AP3B2
Genomic and cartography
GoldenPath hg38 (UCSC)AP3B2  -     chr15:82659281-82709908 -  15q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AP3B2  -     15q25.2   [Description]    (hg19-Feb_2009)
EnsemblAP3B2 - 15q25.2 [CytoView hg19]  AP3B2 - 15q25.2 [CytoView hg38]
Mapping of homologs : NCBIAP3B2 [Mapview hg19]  AP3B2 [Mapview hg38]
OMIM602166   617276   
Gene and transcription
Genbank (Entrez)AF022152 AK097827 AK294331 BC008350 BC026700
RefSeq transcript (Entrez)NM_001278511 NM_001278512 NM_001348440 NM_001348441 NM_004644
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AP3B2
Cluster EST : UnigeneHs.686247 [ NCBI ]
CGAP (NCI)Hs.686247
Alternative Splicing GalleryENSG00000103723
Gene ExpressionAP3B2 [ NCBI-GEO ]   AP3B2 [ EBI - ARRAY_EXPRESS ]   AP3B2 [ SEEK ]   AP3B2 [ MEM ]
Gene Expression Viewer (FireBrowse)AP3B2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8120
GTEX Portal (Tissue expression)AP3B2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13367   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ13367  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ13367
Splice isoforms : SwissVarQ13367
PhosPhoSitePlusQ13367
Domains : Interpro (EBI)AP3_beta    AP3B_C    AP_beta    ARM-like    ARM-type_fold    Clathrin/coatomer_adapt-like_N    Clathrin_g-adaptin_app    Coatomer/clathrin_app_Ig-like   
Domain families : Pfam (Sanger)Adaptin_N (PF01602)    AP3B1_C (PF14796)   
Domain families : Pfam (NCBI)pfam01602    pfam14796   
Domain families : Smart (EMBL)AP3B1_C (SM01355)  
Conserved Domain (NCBI)AP3B2
DMDM Disease mutations8120
Blocks (Seattle)AP3B2
SuperfamilyQ13367
Human Protein AtlasENSG00000103723
Peptide AtlasQ13367
HPRD03699
IPIIPI00005793   IPI01011317   IPI01015491   IPI01012046   IPI01012451   IPI01015207   IPI00910526   
Protein Interaction databases
DIP (DOE-UCLA)Q13367
IntAct (EBI)Q13367
FunCoupENSG00000103723
BioGRIDAP3B2
STRING (EMBL)AP3B2
ZODIACAP3B2
Ontologies - Pathways
QuickGOQ13367
Ontology : AmiGOtransporter activity  intracellular protein transport  post-Golgi vesicle-mediated transport  anterograde axonal transport  AP-3 adaptor complex  clathrin adaptor complex  COPI-coated vesicle  clathrin-coated vesicle membrane  anterograde synaptic vesicle transport  axon cytoplasm  
Ontology : EGO-EBItransporter activity  intracellular protein transport  post-Golgi vesicle-mediated transport  anterograde axonal transport  AP-3 adaptor complex  clathrin adaptor complex  COPI-coated vesicle  clathrin-coated vesicle membrane  anterograde synaptic vesicle transport  axon cytoplasm  
Pathways : KEGGLysosome   
NDEx NetworkAP3B2
Atlas of Cancer Signalling NetworkAP3B2
Wikipedia pathwaysAP3B2
Orthology - Evolution
OrthoDB8120
GeneTree (enSembl)ENSG00000103723
Phylogenetic Trees/Animal Genes : TreeFamAP3B2
HOVERGENQ13367
HOGENOMQ13367
Homologs : HomoloGeneAP3B2
Homology/Alignments : Family Browser (UCSC)AP3B2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAP3B2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AP3B2
dbVarAP3B2
ClinVarAP3B2
1000_GenomesAP3B2 
Exome Variant ServerAP3B2
ExAC (Exome Aggregation Consortium)AP3B2 (select the gene name)
Genetic variants : HAPMAP8120
Genomic Variants (DGV)AP3B2 [DGVbeta]
DECIPHERAP3B2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAP3B2 
Mutations
ICGC Data PortalAP3B2 
TCGA Data PortalAP3B2 
Broad Tumor PortalAP3B2
OASIS PortalAP3B2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAP3B2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAP3B2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AP3B2
DgiDB (Drug Gene Interaction Database)AP3B2
DoCM (Curated mutations)AP3B2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AP3B2 (select a term)
intoGenAP3B2
Cancer3DAP3B2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602166    617276   
Orphanet
MedgenAP3B2
Genetic Testing Registry AP3B2
NextProtQ13367 [Medical]
TSGene8120
GENETestsAP3B2
Target ValidationAP3B2
Huge Navigator AP3B2 [HugePedia]
snp3D : Map Gene to Disease8120
BioCentury BCIQAP3B2
ClinGenAP3B2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8120
Chemical/Pharm GKB GenePA24858
Clinical trialAP3B2
Miscellaneous
canSAR (ICR)AP3B2 (select the gene name)
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAP3B2
EVEXAP3B2
GoPubMedAP3B2
iHOPAP3B2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:38:27 CEST 2017

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