APC2 (adenomatosis polyposis coli 2)

Identity

Other names	APCL
HGNC	APC2
Location	19p13.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	APC2   24036
Entrez_Gene	APC2  10297  adenomatosis polyposis coli 2
	Cards
GeneCards	APC2
Ensembl	APC2 [Search_View]   ENSG00000115266 [Gene_View]
Genatlas	APC2
GeneLynx	APC2
eGenome	APC2
euGene	10297
	Genomic and cartography
GoldenPath	APC2  -  19p13.3   chr19:1401148-1424243 +  19p13.3   [Description]    (hg18-March_2006)
Ensembl	APC2 - 19p13.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	APC2
	Gene and transcription
Genbank	AB012162 [ ENTREZ ]
Genbank	AF110334 [ ENTREZ ]
Genbank	AF128222 [ ENTREZ ]
Genbank	AJ012652 [ ENTREZ ]
Genbank	AL078616 [ ENTREZ ]
RefSeq	NM_005883 [ SRS ]    NM_005883 [ ENTREZ ]
RefSeq	AC_000062 [ SRS ]    AC_000062 [ ENTREZ ]
RefSeq	AC_000151 [ SRS ]    AC_000151 [ ENTREZ ]
RefSeq	NC_000019 [ SRS ]    NC_000019 [ ENTREZ ]
RefSeq	NT_011255 [ SRS ]    NT_011255 [ ENTREZ ]
RefSeq	NW_001838476 [ SRS ]    NW_001838476 [ ENTREZ ]
RefSeq	NW_927173 [ SRS ]    NW_927173 [ ENTREZ ]
AceView	APC2 AceView - NCBI
Unigene	Hs.446376 [ SRS ]    Hs.446376 [ NCBI ]     HS446376 [ spliceNest ]
Fast-db	1167 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O95996 [ SRS]    O95996 [ EXPASY ]     O95996 [ INTERPRO ]     O95996 [ UNIPROT ]
Prosite	PS50176 ARM_REPEAT [ SRS ]    PS50176 ARM_REPEAT [ Expasy ]
Interpro	IPR009234 APC_basic [ SRS ]    IPR009234 APC_basic [ EBI ]
Interpro	IPR009223 APC_crr [ SRS ]    IPR009223 APC_crr [ EBI ]
Interpro	IPR011989 ARM-like [ SRS ]    IPR011989 ARM-like [ EBI ]
Interpro	IPR000225 Armadillo [ SRS ]    IPR000225 Armadillo [ EBI ]
Interpro	IPR009224 SAMP [ SRS ]    IPR009224 SAMP [ EBI ]
CluSTr	O95996
Pfam	PF05956 APC_basic [ SRS ]    PF05956 APC_basic [ Sanger ]    pfam05956 [ NCBI-CDD ]
Pfam	PF05923 APC_crr [ SRS ]    PF05923 APC_crr [ Sanger ]    pfam05923 [ NCBI-CDD ]
Pfam	PF00514 Arm [ SRS ]    PF00514 Arm [ Sanger ]    pfam00514 [ NCBI-CDD ]
Pfam	PF05924 SAMP [ SRS ]    PF05924 SAMP [ Sanger ]    pfam05924 [ NCBI-CDD ]
Smart	SM00185 ARM [EMBL]
Blocks	O95996
HPRD	09802
	Protein Interaction databases
DIP	O95996
IntAct	O95996
	Polymorphism : SNP, mutations, diseases
OMIM	612034    [ map ]
GENECLINICS	612034
SNP	APC2 [dbSNP-NCBI]
SNP	NM_005883 [SNP-NCI]
SNP	APC2 [GeneSNPs - Utah]  APC2] [HGBASE - SRS]
HAPMAP	APC2 [HAPMAP]
COSMIC	APC2 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	APC2
	General knowledge
Family Browser	APC2 [UCSC Family Browser]
SOURCE	NM_005883
SMD	Hs.446376
SAGE	Hs.446376
GO	Golgi membrane [Amigo]  Golgi membrane
GO	cytoplasm [Amigo]  cytoplasm
GO	Golgi apparatus [Amigo]  Golgi apparatus
GO	cytoskeleton [Amigo]  cytoskeleton
GO	microtubule [Amigo]  microtubule
GO	plasma membrane [Amigo]  plasma membrane
GO	protein complex assembly [Amigo]  protein complex assembly
GO	signal transduction [Amigo]  signal transduction
GO	beta-catenin binding [Amigo]  beta-catenin binding
GO	microtubule binding [Amigo]  microtubule binding
GO	Wnt receptor signaling pathway [Amigo]  Wnt receptor signaling pathway
GO	catenin complex [Amigo]  catenin complex
KEGG	Wnt signaling pathway
KEGG	Regulation of actin cytoskeleton
KEGG	Colorectal cancer
PubGene	APC2
TreeFam	APC2
CTD	10297 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	APC2 Related clones (RZPD - Berlin)
	PubMed
PubMed	7 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:00:25 2008