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APCDD1 (adenomatosis polyposis coli down-regulated 1)

Identity

Other namesB7323
DRAPC1
FP7019
HGNC (Hugo) APCDD1
Location 18p11.22
Location_base_pair Starts at 10444625 and ends at 10478698 bp from pter ( according to hg18-March_2006)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)APCDD1   15718
Entrez_Gene (NCBI)APCDD1  147495  adenomatosis polyposis coli down-regulated 1
Cards
GeneCards (Weizmann)APCDD1
Ensembl (Hinxton)ENSG00000154856 [Gene_View]  APCDD1 [Vega]
AceView (NCBI)APCDD1
Genatlas (Paris)APCDD1
euGene (Indiana)147495
SOURCE (Stanford)NM_153000
Gene Expression (Array Express) ENSG00000154856
Genomic and cartography
GoldenPath (UCSC)APCDD1  -  18p11.22   chr18:10444625-10478698 +  18p11.22   [Description]    (hg18-March_2006)
EnsemblAPCDD1 - 18p11.22 [CytoView]
Mapping of homologs : NCBIAPCDD1 [Mapview]
OMIM607479   
Gene and transcription
Gene : Genbank (Entrez)AB056722 AB104887 AF461902 AK300743 AK303076
Reference sequence (RefSeq transcript) :SRSNM_153000
Reference transcript : EntrezNM_153000
RefSeq genomic : SRSAC_000061 AC_000150 NC_000018 NT_010859 NW_001838461 NW_926940
RefSeq genomic : EntrezAC_000061 AC_000150 NC_000018 NT_010859 NW_001838461 NW_926940
Consensus coding sequences : CCDS NCBIAPCDD1
Cluster EST : UnigeneHs.293274 [ SRS ] Hs.293274 [ NCBI ]
Alternative Splicing : Fast-db (Paris)1313
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtQ8J025 (SRS) Q8J025 (Expasy) Q8J025 (Uniprot)
With graphics : InterProQ8J025
Splice isoforms : VarSplice FASTAQ8J025(VarSplice FASTA)
Related proteins : CluSTrQ8J025
Domain families : Pfam SRS
Domain families : Pfam Sanger
Domain families : Pfam NCBI
Blocks (Seattle)Q8J025
Crystal structure of protein : PDB SRS
Crystal structure of protein : PDBSum
Crystal structure of protein : IMB
Crystal structure of protein : PDB RSDB
HPRD09595
Protein Interaction databases
DIP (DOE-UCLA)Q8J025
IntAct (EBI)Q8J025
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIAPCDD1
SNP : GeneSNP UtahAPCDD1
SNP : HGBaseAPCDD1
Genetic variants : HAPMAPAPCDD1
Somatic Mutations in Cancer : COSMICAPCDD1 
Mutations and Diseases : HGMDAPCDD1
Hereditary diseases : OMIM607479   
Hereditary diseases : GENETests607479   
Diseases : Genetic AssociationAPCDD1
General knowledge
Homologs : HomoloGeneAPCDD1
Homology/Alignments : Family Browser UCSCAPCDD1
Phylogenetic Trees/Animal Genes : TreeFamAPCDD1
Chemical/Protein Interactions : CTD147495
Keywords Ontology : AmiGOmembrane  integral to membrane  
Keywords Ontology : EGO-EBImembrane  integral to membrane  
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
Probes : ImagenesAPCDD1 Related clones (RZPD - Berlin)
Literature
PubMed4 Pubmed reference(s) in Entrez
PubGeneAPCDD1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2009Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 27 10:41:36 CET 2010
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