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APELA (apelin receptor early endogenous ligand)

Identity

Alias_symbol (synonym)Ende
ELA
tdl
Other alias
HGNC (Hugo) APELA
LocusID (NCBI) 100506013
Atlas_Id 60420
Location 4q32.3  [Link to chromosome band 4q32]
Location_base_pair Starts at 164876988 and ends at 164897527 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)APELA   48925
Cards
Entrez_Gene (NCBI)APELA  100506013  apelin receptor early endogenous ligand
AliasesELA; Ende; tdl
GeneCards (Weizmann)APELA
Ensembl hg19 (Hinxton)ENSG00000248329 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248329 [Gene_View]  chr4:164876988-164897527 [Contig_View]  APELA [Vega]
ICGC DataPortalENSG00000248329
TCGA cBioPortalAPELA
AceView (NCBI)APELA
Genatlas (Paris)APELA
WikiGenes100506013
SOURCE (Princeton)APELA
Genetics Home Reference (NIH)APELA
Genomic and cartography
GoldenPath hg38 (UCSC)APELA  -     chr4:164876988-164897527 +  4q32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)APELA  -     4q32.3   [Description]    (hg19-Feb_2009)
EnsemblAPELA - 4q32.3 [CytoView hg19]  APELA - 4q32.3 [CytoView hg38]
Mapping of homologs : NCBIAPELA [Mapview hg19]  APELA [Mapview hg38]
OMIM615594   
Gene and transcription
Genbank (Entrez)AK092578 EF565119 KJ158076
RefSeq transcript (Entrez)NM_001297550
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)APELA
Cluster EST : UnigeneHs.105196 [ NCBI ]
CGAP (NCI)Hs.105196
Alternative Splicing GalleryENSG00000248329
Gene ExpressionAPELA [ NCBI-GEO ]   APELA [ EBI - ARRAY_EXPRESS ]   APELA [ SEEK ]   APELA [ MEM ]
Gene Expression Viewer (FireBrowse)APELA [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100506013
GTEX Portal (Tissue expression)APELA
Human Protein AtlasENSG00000248329-APELA [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0DMC3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0DMC3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0DMC3
Splice isoforms : SwissVarP0DMC3
PhosPhoSitePlusP0DMC3
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)APELA
DMDM Disease mutations100506013
Blocks (Seattle)APELA
SuperfamilyP0DMC3
Human Protein Atlas [tissue]ENSG00000248329-APELA [tissue]
Peptide AtlasP0DMC3
Protein Interaction databases
DIP (DOE-UCLA)P0DMC3
IntAct (EBI)P0DMC3
FunCoupENSG00000248329
BioGRIDAPELA
STRING (EMBL)APELA
ZODIACAPELA
Ontologies - Pathways
QuickGOP0DMC3
Ontology : AmiGOhormone activity  extracellular region  extracellular space  endoderm development  heart development  apelin receptor binding  apelin receptor signaling pathway  SMAD protein signal transduction  mesendoderm migration  cell migration involved in mesendoderm migration  
Ontology : EGO-EBIhormone activity  extracellular region  extracellular space  endoderm development  heart development  apelin receptor binding  apelin receptor signaling pathway  SMAD protein signal transduction  mesendoderm migration  cell migration involved in mesendoderm migration  
NDEx NetworkAPELA
Atlas of Cancer Signalling NetworkAPELA
Wikipedia pathwaysAPELA
Orthology - Evolution
OrthoDB100506013
GeneTree (enSembl)ENSG00000248329
Phylogenetic Trees/Animal Genes : TreeFamAPELA
HOVERGENP0DMC3
HOGENOMP0DMC3
Homologs : HomoloGeneAPELA
Homology/Alignments : Family Browser (UCSC)APELA
Gene fusions - Rearrangements
Tumor Fusion PortalAPELA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAPELA [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)APELA
dbVarAPELA
ClinVarAPELA
1000_GenomesAPELA 
Exome Variant ServerAPELA
ExAC (Exome Aggregation Consortium)ENSG00000248329
GNOMAD BrowserENSG00000248329
Genetic variants : HAPMAP100506013
Genomic Variants (DGV)APELA [DGVbeta]
DECIPHERAPELA [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAPELA 
Mutations
ICGC Data PortalAPELA 
TCGA Data PortalAPELA 
Broad Tumor PortalAPELA
OASIS PortalAPELA [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDAPELA
BioMutasearch APELA
DgiDB (Drug Gene Interaction Database)APELA
DoCM (Curated mutations)APELA (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)APELA (select a term)
intoGenAPELA
Cancer3DAPELA(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615594   
Orphanet
DisGeNETAPELA
MedgenAPELA
Genetic Testing Registry APELA
NextProtP0DMC3 [Medical]
TSGene100506013
GENETestsAPELA
Target ValidationAPELA
Huge Navigator APELA [HugePedia]
snp3D : Map Gene to Disease100506013
BioCentury BCIQAPELA
ClinGenAPELA
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506013
Chemical/Pharm GKB GenePA166123664
Clinical trialAPELA
Miscellaneous
canSAR (ICR)APELA (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAPELA
EVEXAPELA
GoPubMedAPELA
iHOPAPELA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:09:36 CET 2017

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