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API5 (apoptosis inhibitor 5)

Identity

Alias_symbol (synonym)AAC-11
API5L1
AAC11
Other alias
HGNC (Hugo) API5
LocusID (NCBI) 8539
Atlas_Id 675
Location 11p12  [Link to chromosome band 11p12]
Location_base_pair Starts at 43311955 and ends at 43344530 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
API5 (11p12) / PLIN3 (19p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)API5   594
Cards
Entrez_Gene (NCBI)API5  8539  apoptosis inhibitor 5
AliasesAAC-11; AAC11
GeneCards (Weizmann)API5
Ensembl hg19 (Hinxton)ENSG00000166181 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166181 [Gene_View]  chr11:43311955-43344530 [Contig_View]  API5 [Vega]
ICGC DataPortalENSG00000166181
TCGA cBioPortalAPI5
AceView (NCBI)API5
Genatlas (Paris)API5
WikiGenes8539
SOURCE (Princeton)API5
Genetics Home Reference (NIH)API5
Genomic and cartography
GoldenPath hg38 (UCSC)API5  -     chr11:43311955-43344530 +  11p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)API5  -     11p12   [Description]    (hg19-Feb_2009)
EnsemblAPI5 - 11p12 [CytoView hg19]  API5 - 11p12 [CytoView hg38]
Mapping of homologs : NCBIAPI5 [Mapview hg19]  API5 [Mapview hg38]
OMIM609774   
Gene and transcription
Genbank (Entrez)AF229253 AF229254 AK021649 AK293303 AK294724
RefSeq transcript (Entrez)NM_001142930 NM_001142931 NM_001243747 NM_006595
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)API5
Cluster EST : UnigeneHs.435771 [ NCBI ]
CGAP (NCI)Hs.435771
Alternative Splicing GalleryENSG00000166181
Gene ExpressionAPI5 [ NCBI-GEO ]   API5 [ EBI - ARRAY_EXPRESS ]   API5 [ SEEK ]   API5 [ MEM ]
Gene Expression Viewer (FireBrowse)API5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8539
GTEX Portal (Tissue expression)API5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BZZ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BZZ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BZZ5
Splice isoforms : SwissVarQ9BZZ5
PhosPhoSitePlusQ9BZZ5
Domains : Interpro (EBI)API5    ARM-like    ARM-type_fold   
Domain families : Pfam (Sanger)API5 (PF05918)   
Domain families : Pfam (NCBI)pfam05918   
Conserved Domain (NCBI)API5
DMDM Disease mutations8539
Blocks (Seattle)API5
PDB (SRS)3U0R    3V6A   
PDB (PDBSum)3U0R    3V6A   
PDB (IMB)3U0R    3V6A   
PDB (RSDB)3U0R    3V6A   
Structural Biology KnowledgeBase3U0R    3V6A   
SCOP (Structural Classification of Proteins)3U0R    3V6A   
CATH (Classification of proteins structures)3U0R    3V6A   
SuperfamilyQ9BZZ5
Human Protein AtlasENSG00000166181
Peptide AtlasQ9BZZ5
HPRD16500
IPIIPI00555572   IPI00554742   IPI00555743   IPI00910664   IPI00855856   IPI00908668   IPI00975957   IPI00978005   IPI00976548   
Protein Interaction databases
DIP (DOE-UCLA)Q9BZZ5
IntAct (EBI)Q9BZZ5
FunCoupENSG00000166181
BioGRIDAPI5
STRING (EMBL)API5
ZODIACAPI5
Ontologies - Pathways
QuickGOQ9BZZ5
Ontology : AmiGORNA binding  protein binding  nucleus  spliceosomal complex  cytoplasm  apoptotic process  membrane  nuclear speck  fibroblast growth factor binding  negative regulation of apoptotic process  negative regulation of apoptotic process  negative regulation of apoptotic process  negative regulation of fibroblast apoptotic process  
Ontology : EGO-EBIRNA binding  protein binding  nucleus  spliceosomal complex  cytoplasm  apoptotic process  membrane  nuclear speck  fibroblast growth factor binding  negative regulation of apoptotic process  negative regulation of apoptotic process  negative regulation of apoptotic process  negative regulation of fibroblast apoptotic process  
NDEx NetworkAPI5
Atlas of Cancer Signalling NetworkAPI5
Wikipedia pathwaysAPI5
Orthology - Evolution
OrthoDB8539
GeneTree (enSembl)ENSG00000166181
Phylogenetic Trees/Animal Genes : TreeFamAPI5
HOVERGENQ9BZZ5
HOGENOMQ9BZZ5
Homologs : HomoloGeneAPI5
Homology/Alignments : Family Browser (UCSC)API5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAPI5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)API5
dbVarAPI5
ClinVarAPI5
1000_GenomesAPI5 
Exome Variant ServerAPI5
ExAC (Exome Aggregation Consortium)API5 (select the gene name)
Genetic variants : HAPMAP8539
Genomic Variants (DGV)API5 [DGVbeta]
DECIPHERAPI5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAPI5 
Mutations
ICGC Data PortalAPI5 
TCGA Data PortalAPI5 
Broad Tumor PortalAPI5
OASIS PortalAPI5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAPI5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAPI5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch API5
DgiDB (Drug Gene Interaction Database)API5
DoCM (Curated mutations)API5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)API5 (select a term)
intoGenAPI5
Cancer3DAPI5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609774   
Orphanet
MedgenAPI5
Genetic Testing Registry API5
NextProtQ9BZZ5 [Medical]
TSGene8539
GENETestsAPI5
Huge Navigator API5 [HugePedia]
snp3D : Map Gene to Disease8539
BioCentury BCIQAPI5
ClinGenAPI5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8539
Chemical/Pharm GKB GenePA24881
Clinical trialAPI5
Miscellaneous
canSAR (ICR)API5 (select the gene name)
Probes
Litterature
PubMed47 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAPI5
EVEXAPI5
GoPubMedAPI5
iHOPAPI5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:06:15 CEST 2017

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