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APOA1-AS (APOA1 antisense RNA)

Identity

Other alias-
HGNC (Hugo) APOA1-AS
LocusID (NCBI) 104326055
Atlas_Id 77053
Location 11q23.3  [Link to chromosome band 11q23]
Location_base_pair Starts at 116706833 and ends at 116726445 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)APOA1-AS   40079
Cards
Entrez_Gene (NCBI)APOA1-AS  104326055  APOA1 antisense RNA
Aliases
GeneCards (Weizmann)APOA1-AS
Ensembl hg19 (Hinxton)ENSG00000235910 [Gene_View]  chr11:116706833-116726445 [Contig_View]  APOA1-AS [Vega]
Ensembl hg38 (Hinxton)ENSG00000235910 [Gene_View]  chr11:116706833-116726445 [Contig_View]  APOA1-AS [Vega]
ICGC DataPortalENSG00000235910
TCGA cBioPortalAPOA1-AS
AceView (NCBI)APOA1-AS
Genatlas (Paris)APOA1-AS
WikiGenes104326055
SOURCE (Princeton)APOA1-AS
Genetics Home Reference (NIH)APOA1-AS
Genomic and cartography
GoldenPath hg19 (UCSC)APOA1-AS  -     chr11:116706833-116726445 +  11q23.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)APOA1-AS  -     11q23.3   [Description]    (hg38-Dec_2013)
EnsemblAPOA1-AS - 11q23.3 [CytoView hg19]  APOA1-AS - 11q23.3 [CytoView hg38]
Mapping of homologs : NCBIAPOA1-AS [Mapview hg19]  APOA1-AS [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA327409 HG504202
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_033899 NW_004929381
Consensus coding sequences : CCDS (NCBI)APOA1-AS
Cluster EST : UnigeneHs.627813 [ NCBI ]
CGAP (NCI)Hs.627813
Alternative Splicing GalleryENSG00000235910
Gene ExpressionAPOA1-AS [ NCBI-GEO ]   APOA1-AS [ EBI - ARRAY_EXPRESS ]   APOA1-AS [ SEEK ]   APOA1-AS [ MEM ]
Gene Expression Viewer (FireBrowse)APOA1-AS [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104326055
GTEX Portal (Tissue expression)APOA1-AS
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)APOA1-AS
DMDM Disease mutations104326055
Blocks (Seattle)APOA1-AS
Human Protein AtlasENSG00000235910
Protein Interaction databases
FunCoupENSG00000235910
BioGRIDAPOA1-AS
STRING (EMBL)APOA1-AS
ZODIACAPOA1-AS
Ontologies - Pathways
Huge Navigator APOA1-AS [HugePedia]
snp3D : Map Gene to Disease104326055
BioCentury BCIQAPOA1-AS
ClinGenAPOA1-AS
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104326055
Clinical trialAPOA1-AS
Miscellaneous
canSAR (ICR)APOA1-AS (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAPOA1-AS
EVEXAPOA1-AS
GoPubMedAPOA1-AS
iHOPAPOA1-AS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 11:54:43 CET 2017

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