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APOC1P1 (apolipoprotein C1 pseudogene 1)

Identity

Alias_namesapolipoprotein C-I pseudogene 1
Other alias-
HGNC (Hugo) APOC1P1
LocusID (NCBI) 342
Atlas_Id 60431
Location 19q13.32  [Link to chromosome band 19q13]
Location_base_pair Starts at 44926803 and ends at 44931386 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)APOC1P1   608
Cards
Entrez_Gene (NCBI)APOC1P1  342  apolipoprotein C1 pseudogene 1
Aliases
GeneCards (Weizmann)APOC1P1
Ensembl hg19 (Hinxton)ENSG00000214855 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214855 [Gene_View]  chr19:44926803-44931386 [Contig_View]  APOC1P1 [Vega]
ICGC DataPortalENSG00000214855
TCGA cBioPortalAPOC1P1
AceView (NCBI)APOC1P1
Genatlas (Paris)APOC1P1
WikiGenes342
SOURCE (Princeton)APOC1P1
Genetics Home Reference (NIH)APOC1P1
Genomic and cartography
GoldenPath hg38 (UCSC)APOC1P1  -     chr19:44926803-44931386 +  19q13.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)APOC1P1  -     19q13.32   [Description]    (hg19-Feb_2009)
EnsemblAPOC1P1 - 19q13.32 [CytoView hg19]  APOC1P1 - 19q13.32 [CytoView hg38]
Mapping of homologs : NCBIAPOC1P1 [Mapview hg19]  APOC1P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AV645786 CB162526 DA636997 DA638554 EF553526
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)APOC1P1
Cluster EST : UnigeneHs.729930 [ NCBI ]
CGAP (NCI)Hs.729930
Alternative Splicing GalleryENSG00000214855
Gene ExpressionAPOC1P1 [ NCBI-GEO ]   APOC1P1 [ EBI - ARRAY_EXPRESS ]   APOC1P1 [ SEEK ]   APOC1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)APOC1P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)342
GTEX Portal (Tissue expression)APOC1P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)APOC1P1
DMDM Disease mutations342
Blocks (Seattle)APOC1P1
Human Protein AtlasENSG00000214855
IPIIPI00921316   
Protein Interaction databases
FunCoupENSG00000214855
BioGRIDAPOC1P1
STRING (EMBL)APOC1P1
ZODIACAPOC1P1
Ontologies - Pathways
Huge Navigator APOC1P1 [HugePedia]
snp3D : Map Gene to Disease342
BioCentury BCIQAPOC1P1
ClinGenAPOC1P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD342
Chemical/Pharm GKB GenePA24899
Clinical trialAPOC1P1
Miscellaneous
canSAR (ICR)APOC1P1 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAPOC1P1
EVEXAPOC1P1
GoPubMedAPOC1P1
iHOPAPOC1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:36 CEST 2017

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