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APOOP5 (apolipoprotein O pseudogene 5)

Identity

Other alias-
HGNC (Hugo) APOOP5
LocusID (NCBI) 644649
Atlas_Id 60437
Location 16q21  [Link to chromosome band 16q21]
Location_base_pair Starts at 59754141 and ends at 59755191 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)APOOP5   48743
Cards
Entrez_Gene (NCBI)APOOP5  644649  apolipoprotein O pseudogene 5
Aliases
GeneCards (Weizmann)APOOP5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:59754141-59755191 [Contig_View]  APOOP5 [Vega]
TCGA cBioPortalAPOOP5
AceView (NCBI)APOOP5
Genatlas (Paris)APOOP5
WikiGenes644649
SOURCE (Princeton)APOOP5
Genetics Home Reference (NIH)APOOP5
Genomic and cartography
GoldenPath hg38 (UCSC)APOOP5  -     chr16:59754141-59755191 -  16q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)APOOP5  -     16q21   [Description]    (hg19-Feb_2009)
EnsemblAPOOP5 - 16q21 [CytoView hg19]  APOOP5 - 16q21 [CytoView hg38]
Mapping of homologs : NCBIAPOOP5 [Mapview hg19]  APOOP5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI016649 BX108667
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)APOOP5
Cluster EST : UnigeneHs.729577 [ NCBI ]
CGAP (NCI)Hs.729577
Gene ExpressionAPOOP5 [ NCBI-GEO ]   APOOP5 [ EBI - ARRAY_EXPRESS ]   APOOP5 [ SEEK ]   APOOP5 [ MEM ]
Gene Expression Viewer (FireBrowse)APOOP5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)644649
GTEX Portal (Tissue expression)APOOP5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)APOOP5
DMDM Disease mutations644649
Blocks (Seattle)APOOP5
Protein Interaction databases
BioGRIDAPOOP5
STRING (EMBL)APOOP5
ZODIACAPOOP5
Ontologies - Pathways
Huge Navigator APOOP5 [HugePedia]
snp3D : Map Gene to Disease644649
BioCentury BCIQAPOOP5
ClinGenAPOOP5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644649
Clinical trialAPOOP5
Miscellaneous
canSAR (ICR)APOOP5 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineAPOOP5
EVEXAPOOP5
GoPubMedAPOOP5
iHOPAPOOP5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:32:50 CET 2017

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