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AQP10 (aquaporin 10)

Identity

Other aliasAQPA_HUMAN
HGNC (Hugo) AQP10
LocusID (NCBI) 89872
Atlas_Id 56181
Location 1q21.3  [Link to chromosome band 1q21]
Location_base_pair Starts at 154321116 and ends at 154325325 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AQP10   16029
Cards
Entrez_Gene (NCBI)AQP10  89872  aquaporin 10
AliasesAQPA_HUMAN
GeneCards (Weizmann)AQP10
Ensembl hg19 (Hinxton)ENSG00000143595 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000143595 [Gene_View]  chr1:154321116-154325325 [Contig_View]  AQP10 [Vega]
ICGC DataPortalENSG00000143595
TCGA cBioPortalAQP10
AceView (NCBI)AQP10
Genatlas (Paris)AQP10
WikiGenes89872
SOURCE (Princeton)AQP10
Genetics Home Reference (NIH)AQP10
Genomic and cartography
GoldenPath hg38 (UCSC)AQP10  -     chr1:154321116-154325325 +  1q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AQP10  -     1q21.3   [Description]    (hg19-Feb_2009)
EnsemblAQP10 - 1q21.3 [CytoView hg19]  AQP10 - 1q21.3 [CytoView hg38]
Mapping of homologs : NCBIAQP10 [Mapview hg19]  AQP10 [Mapview hg38]
OMIM606578   
Gene and transcription
Genbank (Entrez)AB066105 AF159174 AK314993 BC069607 BC074896
RefSeq transcript (Entrez)NM_080429
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AQP10
Cluster EST : UnigeneHs.259048 [ NCBI ]
CGAP (NCI)Hs.259048
Alternative Splicing GalleryENSG00000143595
Gene ExpressionAQP10 [ NCBI-GEO ]   AQP10 [ EBI - ARRAY_EXPRESS ]   AQP10 [ SEEK ]   AQP10 [ MEM ]
Gene Expression Viewer (FireBrowse)AQP10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)89872
GTEX Portal (Tissue expression)AQP10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96PS8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96PS8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96PS8
Splice isoforms : SwissVarQ96PS8
PhosPhoSitePlusQ96PS8
Domaine pattern : Prosite (Expaxy)MIP (PS00221)   
Domains : Interpro (EBI)Aquaporin-like    Aquaporin_10    MIP    MIP_CS   
Domain families : Pfam (Sanger)MIP (PF00230)   
Domain families : Pfam (NCBI)pfam00230   
Conserved Domain (NCBI)AQP10
DMDM Disease mutations89872
Blocks (Seattle)AQP10
SuperfamilyQ96PS8
Human Protein AtlasENSG00000143595
Peptide AtlasQ96PS8
HPRD07361
IPIIPI00185014   IPI00044651   
Protein Interaction databases
DIP (DOE-UCLA)Q96PS8
IntAct (EBI)Q96PS8
FunCoupENSG00000143595
BioGRIDAQP10
STRING (EMBL)AQP10
ZODIACAQP10
Ontologies - Pathways
QuickGOQ96PS8
Ontology : AmiGOplasma membrane  water transport  response to toxic substance  water channel activity  glycerol channel activity  urea channel activity  glycerol transport  integral component of membrane  urea transmembrane transport  
Ontology : EGO-EBIplasma membrane  water transport  response to toxic substance  water channel activity  glycerol channel activity  urea channel activity  glycerol transport  integral component of membrane  urea transmembrane transport  
NDEx NetworkAQP10
Atlas of Cancer Signalling NetworkAQP10
Wikipedia pathwaysAQP10
Orthology - Evolution
OrthoDB89872
GeneTree (enSembl)ENSG00000143595
Phylogenetic Trees/Animal Genes : TreeFamAQP10
HOVERGENQ96PS8
HOGENOMQ96PS8
Homologs : HomoloGeneAQP10
Homology/Alignments : Family Browser (UCSC)AQP10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAQP10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AQP10
dbVarAQP10
ClinVarAQP10
1000_GenomesAQP10 
Exome Variant ServerAQP10
ExAC (Exome Aggregation Consortium)AQP10 (select the gene name)
Genetic variants : HAPMAP89872
Genomic Variants (DGV)AQP10 [DGVbeta]
DECIPHERAQP10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAQP10 
Mutations
ICGC Data PortalAQP10 
TCGA Data PortalAQP10 
Broad Tumor PortalAQP10
OASIS PortalAQP10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAQP10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAQP10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AQP10
DgiDB (Drug Gene Interaction Database)AQP10
DoCM (Curated mutations)AQP10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AQP10 (select a term)
intoGenAQP10
Cancer3DAQP10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606578   
Orphanet
MedgenAQP10
Genetic Testing Registry AQP10
NextProtQ96PS8 [Medical]
TSGene89872
GENETestsAQP10
Target ValidationAQP10
Huge Navigator AQP10 [HugePedia]
snp3D : Map Gene to Disease89872
BioCentury BCIQAQP10
ClinGenAQP10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD89872
Chemical/Pharm GKB GenePA24919
Clinical trialAQP10
Miscellaneous
canSAR (ICR)AQP10 (select the gene name)
Probes
Litterature
PubMed40 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAQP10
EVEXAQP10
GoPubMedAQP10
iHOPAQP10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:24:08 CEST 2017

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