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AQP11 (aquaporin 11)

Identity

Other aliasAQPX1
HGNC (Hugo) AQP11
LocusID (NCBI) 282679
Atlas_Id 60441
Location 11q14.1  [Link to chromosome band 11q14]
Location_base_pair Starts at 77589635 and ends at 77610356 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CLNS1A (11q14.1) / AQP11 (11q14.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AQP11   19940
Cards
Entrez_Gene (NCBI)AQP11  282679  aquaporin 11
AliasesAQPX1
GeneCards (Weizmann)AQP11
Ensembl hg19 (Hinxton)ENSG00000178301 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178301 [Gene_View]  chr11:77589635-77610356 [Contig_View]  AQP11 [Vega]
ICGC DataPortalENSG00000178301
TCGA cBioPortalAQP11
AceView (NCBI)AQP11
Genatlas (Paris)AQP11
WikiGenes282679
SOURCE (Princeton)AQP11
Genetics Home Reference (NIH)AQP11
Genomic and cartography
GoldenPath hg38 (UCSC)AQP11  -     chr11:77589635-77610356 +  11q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AQP11  -     11q14.1   [Description]    (hg19-Feb_2009)
EnsemblAQP11 - 11q14.1 [CytoView hg19]  AQP11 - 11q14.1 [CytoView hg38]
Mapping of homologs : NCBIAQP11 [Mapview hg19]  AQP11 [Mapview hg38]
OMIM609914   
Gene and transcription
Genbank (Entrez)AB028147 AK075346 AK311096 BC040443 BJ994586
RefSeq transcript (Entrez)NM_173039
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AQP11
Cluster EST : UnigeneHs.503345 [ NCBI ]
CGAP (NCI)Hs.503345
Alternative Splicing GalleryENSG00000178301
Gene ExpressionAQP11 [ NCBI-GEO ]   AQP11 [ EBI - ARRAY_EXPRESS ]   AQP11 [ SEEK ]   AQP11 [ MEM ]
Gene Expression Viewer (FireBrowse)AQP11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)282679
GTEX Portal (Tissue expression)AQP11
Human Protein AtlasENSG00000178301-AQP11 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NBQ7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NBQ7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NBQ7
Splice isoforms : SwissVarQ8NBQ7
PhosPhoSitePlusQ8NBQ7
Domains : Interpro (EBI)Aquaporin-like    Aquaporin_11    Aquaporin_11/12    MIP   
Domain families : Pfam (Sanger)MIP (PF00230)   
Domain families : Pfam (NCBI)pfam00230   
Conserved Domain (NCBI)AQP11
DMDM Disease mutations282679
Blocks (Seattle)AQP11
SuperfamilyQ8NBQ7
Human Protein Atlas [tissue]ENSG00000178301-AQP11 [tissue]
Peptide AtlasQ8NBQ7
HPRD16503
IPIIPI00168299   
Protein Interaction databases
DIP (DOE-UCLA)Q8NBQ7
IntAct (EBI)Q8NBQ7
FunCoupENSG00000178301
BioGRIDAQP11
STRING (EMBL)AQP11
ZODIACAQP11
Ontologies - Pathways
QuickGOQ8NBQ7
Ontology : AmiGOmolecular_function  transporter activity  endoplasmic reticulum  cytosol  plasma membrane  ion transport  water transport  cell surface  glycerol transport  urea transport  integral component of membrane  dendrite  endosomal lumen acidification  protein homooligomerization  proximal tubule development  
Ontology : EGO-EBImolecular_function  transporter activity  endoplasmic reticulum  cytosol  plasma membrane  ion transport  water transport  cell surface  glycerol transport  urea transport  integral component of membrane  dendrite  endosomal lumen acidification  protein homooligomerization  proximal tubule development  
NDEx NetworkAQP11
Atlas of Cancer Signalling NetworkAQP11
Wikipedia pathwaysAQP11
Orthology - Evolution
OrthoDB282679
GeneTree (enSembl)ENSG00000178301
Phylogenetic Trees/Animal Genes : TreeFamAQP11
HOVERGENQ8NBQ7
HOGENOMQ8NBQ7
Homologs : HomoloGeneAQP11
Homology/Alignments : Family Browser (UCSC)AQP11
Gene fusions - Rearrangements
Tumor Fusion PortalAQP11
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAQP11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AQP11
dbVarAQP11
ClinVarAQP11
1000_GenomesAQP11 
Exome Variant ServerAQP11
ExAC (Exome Aggregation Consortium)ENSG00000178301
GNOMAD BrowserENSG00000178301
Genetic variants : HAPMAP282679
Genomic Variants (DGV)AQP11 [DGVbeta]
DECIPHERAQP11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAQP11 
Mutations
ICGC Data PortalAQP11 
TCGA Data PortalAQP11 
Broad Tumor PortalAQP11
OASIS PortalAQP11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAQP11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAQP11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AQP11
DgiDB (Drug Gene Interaction Database)AQP11
DoCM (Curated mutations)AQP11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AQP11 (select a term)
intoGenAQP11
Cancer3DAQP11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609914   
Orphanet
DisGeNETAQP11
MedgenAQP11
Genetic Testing Registry AQP11
NextProtQ8NBQ7 [Medical]
TSGene282679
GENETestsAQP11
Target ValidationAQP11
Huge Navigator AQP11 [HugePedia]
snp3D : Map Gene to Disease282679
BioCentury BCIQAQP11
ClinGenAQP11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD282679
Chemical/Pharm GKB GenePA134949682
Clinical trialAQP11
Miscellaneous
canSAR (ICR)AQP11 (select the gene name)
Probes
Litterature
PubMed36 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAQP11
EVEXAQP11
GoPubMedAQP11
iHOPAQP11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 19:19:00 CET 2017

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