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AQP12B (aquaporin 12B)

Identity

Alias_namesINSSA3
insulin synthesis associated 3
Other alias
HGNC (Hugo) AQP12B
LocusID (NCBI) 653437
Atlas_Id 60443
Location 2q37.3  [Link to chromosome band 2q37]
Location_base_pair Starts at 241615835 and ends at 241622317 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AQP12B   6096
Cards
Entrez_Gene (NCBI)AQP12B  653437  aquaporin 12B
AliasesINSSA3
GeneCards (Weizmann)AQP12B
Ensembl hg19 (Hinxton)ENSG00000185176 [Gene_View]  chr2:241615835-241622317 [Contig_View]  AQP12B [Vega]
Ensembl hg38 (Hinxton)ENSG00000185176 [Gene_View]  chr2:241615835-241622317 [Contig_View]  AQP12B [Vega]
ICGC DataPortalENSG00000185176
TCGA cBioPortalAQP12B
AceView (NCBI)AQP12B
Genatlas (Paris)AQP12B
WikiGenes653437
SOURCE (Princeton)AQP12B
Genetics Home Reference (NIH)AQP12B
Genomic and cartography
GoldenPath hg19 (UCSC)AQP12B  -     chr2:241615835-241622317 -  2q37.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)AQP12B  -     2q37.3   [Description]    (hg38-Dec_2013)
EnsemblAQP12B - 2q37.3 [CytoView hg19]  AQP12B - 2q37.3 [CytoView hg38]
Mapping of homologs : NCBIAQP12B [Mapview hg19]  AQP12B [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC041460 BC139748 BC157895 BC171912
RefSeq transcript (Entrez)NM_001102467
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929308
Consensus coding sequences : CCDS (NCBI)AQP12B
Cluster EST : UnigeneHs.437167 [ NCBI ]
CGAP (NCI)Hs.437167
Alternative Splicing GalleryENSG00000185176
Gene ExpressionAQP12B [ NCBI-GEO ]   AQP12B [ EBI - ARRAY_EXPRESS ]   AQP12B [ SEEK ]   AQP12B [ MEM ]
Gene Expression Viewer (FireBrowse)AQP12B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)653437
GTEX Portal (Tissue expression)AQP12B
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NM10   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NM10  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NM10
Splice isoforms : SwissVarA6NM10
PhosPhoSitePlusA6NM10
Domains : Interpro (EBI)Aquaporin-like    Aquaporin_11/12    Aquaporin_12    MIP   
Domain families : Pfam (Sanger)MIP (PF00230)   
Domain families : Pfam (NCBI)pfam00230   
Conserved Domain (NCBI)AQP12B
DMDM Disease mutations653437
Blocks (Seattle)AQP12B
SuperfamilyA6NM10
Human Protein AtlasENSG00000185176
Peptide AtlasA6NM10
IPIIPI00889507   IPI00856090   IPI00216841   IPI00892773   
Protein Interaction databases
DIP (DOE-UCLA)A6NM10
IntAct (EBI)A6NM10
FunCoupENSG00000185176
BioGRIDAQP12B
STRING (EMBL)AQP12B
ZODIACAQP12B
Ontologies - Pathways
QuickGOA6NM10
Ontology : AmiGOtransporter activity  transport  integral component of membrane  
Ontology : EGO-EBItransporter activity  transport  integral component of membrane  
NDEx NetworkAQP12B
Atlas of Cancer Signalling NetworkAQP12B
Wikipedia pathwaysAQP12B
Orthology - Evolution
OrthoDB653437
GeneTree (enSembl)ENSG00000185176
Phylogenetic Trees/Animal Genes : TreeFamAQP12B
HOVERGENA6NM10
HOGENOMA6NM10
Homologs : HomoloGeneAQP12B
Homology/Alignments : Family Browser (UCSC)AQP12B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAQP12B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AQP12B
dbVarAQP12B
ClinVarAQP12B
1000_GenomesAQP12B 
Exome Variant ServerAQP12B
ExAC (Exome Aggregation Consortium)AQP12B (select the gene name)
Genetic variants : HAPMAP653437
Genomic Variants (DGV)AQP12B [DGVbeta]
DECIPHER (Syndromes)2:241615835-241622317  ENSG00000185176
CONAN: Copy Number AnalysisAQP12B 
Mutations
ICGC Data PortalAQP12B 
TCGA Data PortalAQP12B 
Broad Tumor PortalAQP12B
OASIS PortalAQP12B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAQP12B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAQP12B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AQP12B
DgiDB (Drug Gene Interaction Database)AQP12B
DoCM (Curated mutations)AQP12B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AQP12B (select a term)
intoGenAQP12B
Cancer3DAQP12B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenAQP12B
Genetic Testing Registry AQP12B
NextProtA6NM10 [Medical]
TSGene653437
GENETestsAQP12B
Huge Navigator AQP12B [HugePedia]
snp3D : Map Gene to Disease653437
BioCentury BCIQAQP12B
ClinGenAQP12B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653437
Chemical/Pharm GKB GenePA29902
Clinical trialAQP12B
Miscellaneous
canSAR (ICR)AQP12B (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAQP12B
EVEXAQP12B
GoPubMedAQP12B
iHOPAQP12B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:54:47 CET 2017

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