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AQP4-AS1 (AQP4 antisense RNA 1)

Identity

Alias_namesC18orf16
CHST9-AS1
chromosome 18 open reading frame 16
CHST9 antisense RNA 1
Alias_symbol (synonym)FLJ30507
Other alias
HGNC (Hugo) AQP4-AS1
LocusID (NCBI) 147429
Atlas_Id 60444
Location 18q11.2  [Link to chromosome band 18q11]
Location_base_pair Starts at 26865308 and ends at 26935946 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AQP4-AS1   26399
Cards
Entrez_Gene (NCBI)AQP4-AS1  147429  AQP4 antisense RNA 1
AliasesC18orf16; CHST9-AS1
GeneCards (Weizmann)AQP4-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr18:26865308-26935946 [Contig_View]  AQP4-AS1 [Vega]
TCGA cBioPortalAQP4-AS1
AceView (NCBI)AQP4-AS1
Genatlas (Paris)AQP4-AS1
WikiGenes147429
SOURCE (Princeton)AQP4-AS1
Genetics Home Reference (NIH)AQP4-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)AQP4-AS1  -     chr18:26865308-26935946 +  18q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AQP4-AS1  -     18q11.2   [Description]    (hg19-Feb_2009)
EnsemblAQP4-AS1 - 18q11.2 [CytoView hg19]  AQP4-AS1 - 18q11.2 [CytoView hg38]
Mapping of homologs : NCBIAQP4-AS1 [Mapview hg19]  AQP4-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055069 BC043377 BC105127 BC112070
RefSeq transcript (Entrez)NM_153010
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AQP4-AS1
Cluster EST : UnigeneHs.559280 [ NCBI ]
CGAP (NCI)Hs.559280
Gene ExpressionAQP4-AS1 [ NCBI-GEO ]   AQP4-AS1 [ EBI - ARRAY_EXPRESS ]   AQP4-AS1 [ SEEK ]   AQP4-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)AQP4-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)147429
GTEX Portal (Tissue expression)AQP4-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AQP4-AS1
DMDM Disease mutations147429
Blocks (Seattle)AQP4-AS1
HPRD08510
IPIIPI00043755   
Protein Interaction databases
BioGRIDAQP4-AS1
STRING (EMBL)AQP4-AS1
ZODIACAQP4-AS1
Ontologies - Pathways
Huge Navigator AQP4-AS1 [HugePedia]
snp3D : Map Gene to Disease147429
BioCentury BCIQAQP4-AS1
ClinGenAQP4-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD147429
Chemical/Pharm GKB GenePA134942591
Clinical trialAQP4-AS1
Miscellaneous
canSAR (ICR)AQP4-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAQP4-AS1
EVEXAQP4-AS1
GoPubMedAQP4-AS1
iHOPAQP4-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Sep 18 13:01:37 CEST 2017

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